RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 RBM48Q5RL73 367 aaKnown RBP17.73■□□□□ 0.43
SMPD4-202ENST00000409031 SMIM5Q71RC9 77 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 ST6GALNAC4Q9H4F1 302 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 EI24O14681 340 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 CDH13P55290 713 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 CYP4F2P78329 520 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 RHDQ02161 417 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 CYP4F3Q08477 520 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 FAM131AQ6UXB0 335 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 POPDC2Q9HBU9 364 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 KRCC1Q9NPI7 259 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-202ENST00000409031 SUCOQ9UBS9 1254 aaKnown RBP17.73■□□□□ 0.43
SMPD4-202ENST00000409031 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-202ENST00000409031 CSH1P0DML2 217 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 CSH2P0DML3 217 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 IGFBP5P24593 272 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 TGFB2P61812 414 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 TUBA3CQ13748 450 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 SDE2Q6IQ49 451 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 KLHL35Q6PF15 583 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 RAB42Q8N4Z0 105 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 ZNF696Q9H7X3 374 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 NMRK2Q9NPI5 230 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 ZMYM5Q9UJ78 669 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 DIP2CQ9Y2E4 1556 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 LACTBL1A8MY62 500 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 PMM2O15305 246 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 FTH1P02794 183 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 LINC00032P0C843 101 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 NUP62P37198 522 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-202ENST00000409031 MYLK3Q32MK0 819 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 VPS26BQ4G0F5 336 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 STXBP5Q5T5C0 1151 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 PRR23BQ6ZRT6 265 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 SPATA6LQ8N4H0 392 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 SMG8Q8ND04 991 aaKnown RBP17.73■□□□□ 0.43
SMPD4-202ENST00000409031 LRRC20Q8TCA0 184 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 YME1L1Q96TA2 773 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 SH3BP4Q9P0V3 963 aa17.73■□□□□ 0.43
SMPD4-202ENST00000409031 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■■□□ 17.3
SMPD4-202ENST00000409031 BCAS2O75934 225 aaPredicted RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 OAS1P00973 400 aaKnown RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 GOT1P17174 413 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 FGD3Q5JSP0 725 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 SVOPLQ8N434 492 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 HDAC10Q969S8 669 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 PCDHAC1Q9H158 963 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 CNOT6Q9ULM6 557 aaKnown RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 ENO2P09104 434 aaPredicted RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 SIM2Q14190 667 aaPredicted RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 GPRIN3Q6ZVF9 776 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 UNC93AQ86WB7 457 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 ZFP28Q8NHY6 868 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 BTN2A2Q8WVV5 523 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 VPS35Q96QK1 796 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 MIPEPQ99797 713 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 TDRD1Q9BXT4 1180 aaKnown RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 EHD1Q9H4M9 534 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 OPTCQ9UBM4 332 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 POLLQ9UGP5 575 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 VWA7Q9Y334 891 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 PCP4L1A6NKN8 68 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 RPS7P62081 194 aaKnown RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 POU5F1Q01860 360 aaKnown RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 OR52E8Q6IFG1 317 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 TXNDC11Q6PKC3 985 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 CPNE8Q86YQ8 564 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 HS6ST3Q8IZP7 471 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 ISOC1Q96CN7 298 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 KIDINS220Q9ULH0 1771 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 KNDC1Q76NI1 1749 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 NPHS1O60500 1241 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 GCATO75600 419 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 CYP4B1P13584 511 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 HNF4AP41235 474 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 OR2B6P58173 313 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 GPX6P59796 221 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 SLC9B1Q4ZJI4 515 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 TREML1Q86YW5 311 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 CDYL2Q8N8U2 506 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 OR8H1Q8NGG4 311 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 MRPL48Q96GC5 212 aaKnown RBP17.72■□□□□ 0.43
SMPD4-202ENST00000409031 ARHGAP28Q9P2N2 729 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 SNX7Q9UNH6 387 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 ASB3Q9Y575 518 aa17.72■□□□□ 0.43
SMPD4-202ENST00000409031 RRN3P2A6NIE6 340 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 DENRO43583 198 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 GUCY1B2O75343 617 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 RGS20O76081 388 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 PTGS2P35354 604 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 GSTM5P46439 218 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 EML3Q32P44 896 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 APOBEC3FQ8IUX4 373 aaKnown RBP17.71■□□□□ 0.43
SMPD4-202ENST00000409031 ADAM32Q8TC27 787 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 ATP6V1HQ9UI12 483 aa17.71■□□□□ 0.43
SMPD4-202ENST00000409031 COQ4Q9Y3A0 265 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms