RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 VWA7Q9Y334 891 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 SH3BP1Q9Y3L3 701 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 INSL6Q9Y581 213 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 RAI2Q9Y5P3 530 aa24.77■■□□□ 1.56
DNMT3A-206ENST00000406659 GFRA2O00451 464 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 LINC00271P0C7V0 271 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 ASPHQ12797 758 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 PPIGQ13427 754 aaKnown RBP eCLIP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 FAM83EQ2M2I3 478 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 INO80DQ53TQ3 878 aaPredicted RBP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 ATG14Q6ZNE5 492 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 SDCCAG8Q86SQ7 713 aaPredicted RBP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 TMC8Q8IU68 726 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 FAM217AQ8IXS0 508 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 HEXDCQ8WVB3 486 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 CLP1Q92989 425 aaKnown RBP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 PTCD3Q96EY7 689 aaKnown RBP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 MRPL57Q9BQC6 102 aaKnown RBP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 EBF4Q9BQW3 602 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 ADGRE3Q9BY15 652 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 MRPL46Q9H2W6 279 aaKnown RBP24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 CFAP97Q9P2B7 532 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 PCDHGC4Q9Y5F7 938 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 OBSL1O75147 1896 aa24.76■■□□□ 1.55
DNMT3A-206ENST00000406659 TRAV19A0A0A6YYK7 116 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 TARM1B6A8C7 271 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 TRAFD1O14545 582 aaPredicted RBP24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 CD160O95971 181 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 CSKP41240 450 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 SLC7A9P82251 487 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 AGAP9Q5VTM2 703 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 PNPLA1Q8N8W4 532 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 LPCAT1Q8NF37 534 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 OR4L1Q8NH43 312 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 DDI1Q8WTU0 396 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 BHMTQ93088 406 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 LRRC3Q9BY71 257 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 CATSPERZQ9NTU4 200 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 NLE1Q9NVX2 485 aaPredicted RBP24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 DNAJC28Q9NX36 388 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 ARMCX1Q9P291 453 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 APOBEC2Q9Y235 224 aaKnown RBP24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 SPO11Q9Y5K1 396 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 OR51B4Q9Y5P0 310 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 PRLP01236 227 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 ESRRAP11474 423 aaPredicted RBP24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 CDC25CP30307 473 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 CSHL1Q14406 222 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 TAF1AQ15573 450 aaPredicted RBP24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 SNCBQ16143 134 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 HTR3DQ70Z44 454 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 GLT6D1Q7Z4J2 308 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 MFN1Q8IWA4 741 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 EMILIN2Q9BXX0 1053 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 GPAMQ9HCL2 828 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 IGSF5Q9NSI5 407 aa24.75■■□□□ 1.55
DNMT3A-206ENST00000406659 C2orf81A6NN90 581 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 SERPINA6P08185 405 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 LTA4HP09960 611 aaKnown RBP24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 MYL4P12829 197 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 ALOX15P16050 662 aaPredicted RBP24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 CALB2P22676 271 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 GRIA4P48058 902 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 ALDH18A1P54886 795 aaKnown RBP24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 CFAP157Q5JU67 520 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 FAM45BPQ6NSW5 357 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 KLC3Q6P597 504 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 TDRD5Q8NAT2 981 aaKnown RBP24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 FAM45AQ8TCE6 357 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 CDKN2AIPNLQ96HQ2 116 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 UNKQ9C0B0 810 aaKnown RBP24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 ILKAPQ9H0C8 392 aaPredicted RBP24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 CDH19Q9H159 772 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 LHX3Q9UBR4 397 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 VPS51Q9UID3 782 aa24.74■■□□□ 1.55
DNMT3A-206ENST00000406659 KIAA0100Q14667 2235 aaKnown RBP24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 DLX3O60479 287 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 PDHA1P08559 390 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 PMLP29590 882 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 IDH3AP50213 366 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 ZNF140P52738 457 aaPredicted RBP24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 RHOAP61586 193 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 NCEH1Q6PIU2 408 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 LONP2Q86WA8 852 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 WFDC5Q8TCV5 224 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 CORO1BQ9BR76 489 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 TBC1D10AQ9BXI6 508 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 DRC3Q9H069 523 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 CORO1CQ9ULV4 474 aaPredicted RBP24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 CRYL1Q9Y2S2 319 aa24.73■■□□□ 1.55
DNMT3A-206ENST00000406659 A0A1W2PRU2 124 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 CCDC166P0CW27 439 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 OGNP20774 298 aaKnown RBP24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 NAGLUP54802 743 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 RIPK1Q13546 671 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 RCN2Q14257 317 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 TBCCQ15814 346 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 ZNF781Q8N8C0 355 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 DCAF4L2Q8NA75 395 aa24.72■■□□□ 1.55
DNMT3A-206ENST00000406659 PDCD6IPQ8WUM4 868 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms