RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MXRA8Q9BRK3 442 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 APOL6Q9BWW8 343 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 GLIS2Q9BZE0 524 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 CDT1Q9H211 546 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 OSGEPL1Q9H4B0 414 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 RANGRFQ9HD47 186 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 WDR6Q9NNW5 1121 aaKnown RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 PNRC2Q9NPJ4 139 aaKnown RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 SEMA4GQ9NTN9 838 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 CTNNAL1Q9UBT7 734 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 FBXL17Q9UF56 701 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 PPIEQ9UNP9 301 aaKnown RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 RAP2CQ9Y3L5 183 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 MAU2Q9Y6X3 613 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 FAM169AQ9Y6X4 670 aa4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 FNDC1Q4ZHG4 1894 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P18-201ENST00000406327 ABCA8O94911 1581 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 TRBV5-7A0A0A0MS05 114 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 AKAP8O43823 692 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 ENTPD3O75355 529 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 DAB1O75553 588 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 HSP90AB1P08238 724 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 TSPY4P0CV99 314 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 TSPY10P0CW01 314 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 CD58P19256 250 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 TBXAS1P24557 533 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 CLDN2P57739 230 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 AIMP1Q12904 312 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 ITGADQ13349 1161 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 ALG11Q2TAA5 492 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 ASTE1Q2TB18 679 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 USP41Q3LFD5 358 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 ALDH1L2Q3SY69 923 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 RPUSD3Q6P087 351 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 CRIP3Q6Q6R5 217 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 EPHX4Q8IUS5 362 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 DHX40Q8IX18 779 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 C8orf58Q8NAV2 365 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 KCTD6Q8NC69 237 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 MCPH1Q8NEM0 835 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 GJC3Q8NFK1 279 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 CMASQ8NFW8 434 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 UBE2Q2Q8WVN8 375 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 SLITRK1Q96PX8 696 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 SEPT5Q99719 369 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 TMEM47Q9BQJ4 181 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 PDZD7Q9H5P4 517 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 MLXIPLQ9NP71 852 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 PSD3Q9NYI0 1048 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 GIMAP2Q9UG22 337 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 SEC63Q9UGP8 760 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 AGO2Q9UKV8 859 aaKnown RBP4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 ANKRD30AQ9BXX3 1397 aa4.91□□□□□ -1.62
HMGB3P18-201ENST00000406327 CAMSAP2Q08AD1 1489 aa4.9□□□□□ -1.62
HMGB3P18-201ENST00000406327 ABCC10Q5T3U5 1492 aa4.9□□□□□ -1.62
HMGB3P18-201ENST00000406327 KIR2DS5A0A0G2JLQ3 304 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 FAM237AA0A1B0GTK4 181 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 DDTLA6NHG4 134 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 TSPY2A6NKD2 308 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 LINC01548A6NM66 108 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 HSPB2A8KAH6 182 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 BTBD18B2RXH4 712 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 KLRF2D3W0D1 207 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 KIR2DS3K7RE56 304 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 UGDHO60701 494 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 FZD7O75084 574 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ATP2C2O75185 946 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 TBCAO75347 108 aaKnown RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 GPC4O75487 556 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 NKX2-2O95096 273 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 TSPY3P0CV98 308 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 TSPY8P0CW00 308 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 TFPIP10646 304 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 HSPA5P11021 654 aaKnown RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ENO3P13929 434 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 HSD17B4P51659 736 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 STAT2P52630 851 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 TSPY1Q01534 308 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 GHRHRQ02643 423 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 SLC10A2Q12908 348 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 IKQ13123 557 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 PLCB4Q15147 1175 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 HSPB2Q16082 182 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 SOWAHCQ53LP3 525 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 DCAF6Q58WW2 860 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 MEX3CQ5U5Q3 659 aaKnown RBP4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 CES5AQ6NT32 575 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 MIS18BP1Q6P0N0 1132 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 LCTLQ6UWM7 567 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 SEPT14Q6ZU15 432 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ZNF627Q7L945 461 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 PTF1AQ7RTS3 328 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 MRGPRGQ86SM5 289 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 ARHGEF25Q86VW2 580 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 CAMK1DQ8IU85 385 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 SCML4Q8N228 414 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 MCUQ8NE86 351 aa4.9□□□□□ -1.63
HMGB3P18-201ENST00000406327 APPL2Q8NEU8 664 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms