RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 COQ10BQ9H8M1 238 aa10.79□□□□□ -0.68
CLIP4-204ENST00000404424 NDFIP2Q9NV92 336 aa10.79□□□□□ -0.68
CLIP4-204ENST00000404424 TMCO1Q9UM00 188 aa10.79□□□□□ -0.68
CLIP4-204ENST00000404424 MTF2Q9Y483 593 aaPredicted RBP10.79□□□□□ -0.68
CLIP4-204ENST00000404424 TRPV2Q9Y5S1 764 aa10.79□□□□□ -0.68
CLIP4-204ENST00000404424 TMCC1O94876 653 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 WISP3O95389 354 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 STX1BP61266 288 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF789Q5FWF6 425 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF678Q5SXM1 525 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 ZNF280DQ6N043 979 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 LRTOMTQ8WZ04 291 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 PHF21BQ96EK2 531 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 IMP4Q96G21 291 aaKnown RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 MFSD1Q9H3U5 465 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 TNFRSF12AQ9NP84 129 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 MYLKQ15746 1914 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 A0A1B0GVG6 124 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 ARHGEF37A1IGU5 675 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 C7orf72A4D263 438 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 MLLT6P55198 1093 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 MAP2K5Q13163 448 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 PCSK7Q16549 785 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 PPP1R3AQ16821 1122 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 LRRC23Q53EV4 343 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 MORN1Q5T089 497 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 AGMOQ6ZNB7 445 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 KDELC2Q7Z4H8 507 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 MRPL10Q7Z7H8 261 aaKnown RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 CARM1Q86X55 608 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 DHFR2Q86XF0 187 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 CLYBLQ8N0X4 340 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 OR13J1Q8NGT2 312 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 SCAMP5Q8TAC9 235 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 CASP10Q92851 521 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 LPPQ93052 612 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 LENG1Q96BZ8 264 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 SERPINB11Q96P15 392 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 HOPXQ9BPY8 73 aaPredicted RBP10.78□□□□□ -0.68
CLIP4-204ENST00000404424 TMLHEQ9NVH6 421 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 ARMC1Q9NVT9 282 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 SFMBT1Q9UHJ3 866 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 SNX13Q9Y5W8 968 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 HS3ST4Q9Y661 456 aa10.78□□□□□ -0.68
CLIP4-204ENST00000404424 M0QZQ0 153 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 TRPA1O75762 1119 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 B3GAT3O94766 335 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 H6PDO95479 791 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PEX11BO96011 259 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 ZNF23P17027 643 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 NDST2P52849 883 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 SLC5A3P53794 718 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 USP46P62068 366 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 BEX3Q00994 111 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 NRF1Q16656 503 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 MAP7D1Q3KQU3 841 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 C6orf10Q5SRN2 563 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PRMT9Q6P2P2 845 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 UMODL1-AS1Q8N2C9 162 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 ANKFN1Q8N957 763 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 GOLM1Q8NBJ4 401 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 TSPAN14Q8NG11 270 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 ANKRD49Q8WVL7 239 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 ZUFSPQ96AP4 578 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 SLCO4A1Q96BD0 722 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PAAF1Q9BRP4 392 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 SEMA6AQ9H2E6 1030 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 TIMMDC1Q9NPL8 285 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PNPLA3Q9NST1 481 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 SQORQ9Y6N5 450 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 MROH6A6NGR9 719 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 FAM155AB1AL88 458 aaPredicted RBP10.77□□□□□ -0.69
CLIP4-204ENST00000404424 SUPT7LO94864 414 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 FGF4P08620 206 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 BMP2P12643 396 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PLK1P53350 603 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PURAQ00577 322 aaKnown RBP10.77□□□□□ -0.69
CLIP4-204ENST00000404424 TSPY1Q01534 308 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 TNK2Q07912 1038 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 RALGDSQ12967 914 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 PABPC1LQ4VXU2 614 aaKnown RBP10.77□□□□□ -0.69
CLIP4-204ENST00000404424 MARC1Q5VT66 337 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 ISCA2Q86U28 154 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 LRRTM3Q86VH5 581 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 C19orf60Q96EN9 201 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 MPP6Q9NZW5 540 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 NDUFAF1Q9Y375 327 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 RNF11Q9Y3C5 154 aa10.77□□□□□ -0.69
CLIP4-204ENST00000404424 UBFD1O14562 309 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TNFRSF10BO14763 440 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 MSI1O43347 362 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CSPG5O95196 566 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 S1PR4O95977 384 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SLC2A3P11169 496 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 HDCP19113 662 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 BRCC3P46736 316 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 HERVK_113P63132 956 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TUBA4AP68366 448 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms