RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RHOJQ9H4E5 214 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 WDCPQ9H6R7 721 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PIDD1Q9HB75 910 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC24A3Q9HC58 644 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CHRAC1Q9NRG0 131 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CLDND1Q9NY35 253 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TLK1Q9UKI8 766 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RAP2CQ9Y3L5 183 aa16.05■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC22A2O15244 555 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZBTB14O43829 449 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PDE5AO76074 875 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GLDCP23378 1020 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 POLD2P49005 469 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DLX2Q07687 328 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TBL3Q12788 808 aaKnown RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DLG2Q15700 870 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC9B1Q4ZJI4 515 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RARS2Q5T160 578 aaKnown RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GRASPQ7Z6J2 395 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CDK5RAP1Q96SZ6 601 aaKnown RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ACE2Q9BYF1 805 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 DRC3Q9H069 523 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 S1PR5Q9H228 398 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TCF7L2Q9NQB0 619 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 OR12D3Q9UGF7 316 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC39A10Q9ULF5 831 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 E9PBE3 544 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KLHL41O60662 606 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 JCHAINP01591 159 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 FESP07332 822 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CCR2P41597 374 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ERFP50548 548 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ASPHQ12797 758 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PRSS36Q5K4E3 855 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 LIPMQ5VYY2 423 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KLHDC10Q6PID8 442 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC26A7Q8TE54 656 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PYDC1Q8WXC3 89 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CNDP1Q96KN2 507 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TSC22D3Q99576 134 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TKTL2Q9H0I9 626 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 OLA1Q9NTK5 396 aaKnown RBP16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 POMPQ9Y244 141 aa16.04■□□□□ 0.16
CHRFAM7A-203ENST00000401522 A0A1W2PRU2 124 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SOBPA7XYQ1 873 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MATN2O00339 956 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZNF197O14709 1029 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 HDAC3O15379 428 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 AHCYL1O43865 530 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CACNG3O60359 315 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TLR5O60602 858 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 LRIG2O94898 1065 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 LYNP07948 512 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 THRAP10827 490 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 COL6A2P12110 1019 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NMBRP28336 390 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ABCG1P45844 678 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MTTPP55157 894 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GRM3Q14832 879 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 UGP2Q16851 508 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MSANTD2Q6P1R3 559 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RAPH1Q70E73 1250 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZC3HC1Q86WB0 502 aaKnown RBP16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PDSS2Q86YH6 399 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SHKBP1Q8TBC3 707 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MSLNLQ96KJ4 702 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 GCNAQ96QF7 691 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 APOL2Q9BQE5 337 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SHCBP1LQ9BZQ2 653 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ATXN3LQ9H3M9 355 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TASP1Q9H6P5 420 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 VTI1BQ9UEU0 232 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PRPF19Q9UMS4 504 aaKnown RBP16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 AAR2Q9Y312 384 aaKnown RBP16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NOTCH4Q99466 2003 aa16.03■□□□□ 0.16
CHRFAM7A-203ENST00000401522 LOC100653049A0A140TA62 436 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLCO1B7G3V0H7 640 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SMIM24O75264 130 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MOSPD3O75425 235 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KRT34O76011 436 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 FOSL2P15408 326 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 TPH1P17752 444 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PFKLP17858 780 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PEX19P40855 299 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 RPL14P50914 215 aaKnown RBP16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 NTHL1P78549 312 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 PRKAA1Q13131 559 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SLC5A9Q2M3M2 681 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SETD3Q86TU7 594 aaPredicted RBP16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 ZSCAN18Q8TBC5 510 aaPredicted RBP16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MAPK15Q8TD08 544 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 MRPS31Q92665 395 aaKnown RBP16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 KLHL4Q9C0H6 718 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 OSBPL2Q9H1P3 480 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms