RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RGS16O15492 202 aaPredicted RBP11.74□□□□□ -0.53
SKA3-203ENST00000400018 KRT15P19012 456 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 BCL2L1Q07817 233 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 MPP3Q13368 585 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 TCEA2Q15560 299 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 MYLK3Q32MK0 819 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 ZNF648Q5T619 568 aaPredicted RBP11.74□□□□□ -0.53
SKA3-203ENST00000400018 GRAMD4Q6IC98 578 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 Q6ZS52 159 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 EXOC3L1Q86VI1 746 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 PELI3Q8N2H9 469 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 PHTF2Q8N3S3 785 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 DCAKDQ8WVC6 231 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 HLA-CQ95604 372 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 WRAP53Q9BUR4 548 aaKnown RBP11.74□□□□□ -0.53
SKA3-203ENST00000400018 FKBPLQ9UIM3 349 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 PLA2G4CQ9UP65 541 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 MTX2O75431 263 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 IL1BP01584 269 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 DLDP09622 509 aaKnown RBP11.74□□□□□ -0.53
SKA3-203ENST00000400018 NUDT17P0C025 328 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 UGT1A6P19224 532 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 UGT1A1P22309 533 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 UGT1A4P22310 534 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 UGT1A3P35503 534 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 UGT1A5P35504 534 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 HNF1BP35680 557 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 MTHFRP42898 656 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 GUCY1A3Q02108 690 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 HABP4Q5JVS0 413 aaKnown RBP11.74□□□□□ -0.53
SKA3-203ENST00000400018 GLT6D1Q7Z4J2 308 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 KCNMB4Q86W47 210 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 AHI1Q8N157 1196 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 EIF1ADQ8N9N8 165 aaKnown RBP11.74□□□□□ -0.53
SKA3-203ENST00000400018 KLK6Q92876 244 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 ACDQ96AP0 544 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 ELSPBP1Q96BH3 223 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 SLC13A1Q9BZW2 595 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 PRDM16Q9HAZ2 1276 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 SERGEFQ9UGK8 458 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 PIAS3Q9Y6X2 628 aa11.74□□□□□ -0.53
SKA3-203ENST00000400018 FAM47DPA6NHR8 397 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 K7EQS6 105 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TRAFD1O14545 582 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 HOXC11O43248 304 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 HAUS5O94927 633 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.53
SKA3-203ENST00000400018 LHCGRP22888 699 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 ITPRIPL2Q3MIP1 535 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 LRRC49Q8IUZ0 686 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 BBS5Q8N3I7 341 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 GSDMBQ8TAX9 411 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PIH1D2Q8WWB5 315 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TADA1Q96BN2 335 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 CERS2Q96G23 380 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 SH3GL2Q99962 352 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PLCD4Q9BRC7 762 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 KCNK9Q9NPC2 374 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 EIF2B3Q9NR50 452 aaKnown RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 FAM8A1Q9UBU6 413 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 MBD1Q9UIS9 605 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 FBXO10Q9UK96 956 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 HS3ST2Q9Y278 367 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TCAF1Q9Y4C2 921 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 WDFY3Q8IZQ1 3526 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 WDR91A4D1P6 747 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 GOLGA6CA6NDK9 693 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 OR1I1O60431 355 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 GOLGA6DP0CG33 693 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PGAM1P18669 254 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 MSH2P43246 934 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PXNP49023 591 aaPredicted RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 ZNF33AQ06730 810 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 CARD16Q5EG05 197 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
SKA3-203ENST00000400018 RNF43Q68DV7 783 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 ZNF470Q6ECI4 717 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 CNSTQ6PJW8 725 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 FAM151BQ6UXP7 276 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 FAM124AQ86V42 546 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 PIANPQ8IYJ0 282 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
SKA3-203ENST00000400018 GDAP1Q8TB36 358 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 SCAMP4Q969E2 229 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 MYOCQ99972 504 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 ACSS3Q9H6R3 686 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TRPV4Q9HBA0 871 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 GOLGA6AQ9NYA3 693 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 MARK1Q9P0L2 795 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 ZFATQ9P243 1243 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 CCDC162PA2VCL2 907 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 SHISA7A6NL88 538 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 IQCF5A8MTL0 148 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 TRIM49D1C9J1S8 452 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 SCAMP1O15126 338 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 NDST3O95803 873 aa11.73□□□□□ -0.53
SKA3-203ENST00000400018 IGSF6O95976 241 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms