RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 STX1BP61266 288 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 FAM83EQ2M2I3 478 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 VPS26BQ4G0F5 336 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 PKN3Q6P5Z2 889 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 KDELC2Q7Z4H8 507 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 IPMKQ8NFU5 416 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 SLC45A3Q96JT2 553 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 HSFY1Q96LI6 401 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 C3orf30Q96M34 536 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 PPP1R10Q96QC0 940 aaKnown RBP14.05□□□□□ -0.16
APOB-202ENST00000399256 STAP1Q9ULZ2 295 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 GINS2Q9Y248 185 aa14.05□□□□□ -0.16
APOB-202ENST00000399256 WDR90Q96KV7 1748 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TRIM64A6NGJ6 449 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 UBFD1O14562 309 aaKnown RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 NOL3O60936 208 aaKnown RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 MT-ND1P03886 318 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 CHRM3P20309 590 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 ARNTP27540 789 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 MAP4P27816 1152 aaKnown RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 HALP42357 657 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 PSMD5Q16401 504 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 SLC35B4Q969S0 331 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 HDAC10Q969S8 669 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TEKT5Q96M29 485 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 MTG1Q9BT17 334 aaPredicted RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 MAP10Q9P2G4 905 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TRHDEQ9UKU6 1024 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TRAF6Q9Y4K3 522 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 PTGDR2Q9Y5Y4 395 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 A0A0J9YYE9 177 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 SOCS7O14512 581 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 IPO13O94829 963 aaKnown RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 MTHFD1P11586 935 aaKnown RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 MATN1P21941 496 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 POLR2IP36954 125 aaKnown RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 OXCT1P55809 520 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 KYAT1Q16773 422 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TECRLQ5HYJ1 363 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 EGFLAMQ63HQ2 1017 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 HACD2Q6Y1H2 254 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 CYHR1Q6ZMK1 362 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 PCYOX1LQ8NBM8 494 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 MAGEE2Q8TD90 523 aaPredicted RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 ACDQ96AP0 544 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 NEURL2Q9BR09 285 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 NUP205Q92621 2012 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 A0A087X1B8 175 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 ACOX3O15254 700 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 SPTLC1O15269 473 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 B4GAT1O43505 415 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 CD151P48509 253 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 CCT8P50990 548 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 NFATC3Q12968 1075 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 MOGQ16653 247 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 PCID2Q5JVF3 399 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 GJC2Q5T442 439 aaPredicted RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 GALNT18Q6P9A2 607 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 LBX2Q6XYB7 198 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 IFNEQ86WN2 208 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 DDIASQ8IXT1 998 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 DHRSXQ8N5I4 330 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 ZUFSPQ96AP4 578 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 CENPNQ96H22 339 aaPredicted RBP14.04□□□□□ -0.16
APOB-202ENST00000399256 RHOBTB2Q9BYZ6 727 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TRIM15Q9C019 465 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 TBC1D13Q9NVG8 400 aa14.04□□□□□ -0.16
APOB-202ENST00000399256 A0A0G2JMZ2 1700 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 OTOFQ9HC10 1997 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 RASAL1O95294 804 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CPB1P15086 417 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CDH3P22223 829 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 TTKP33981 857 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ARCN1P48444 511 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 CD300CQ08708 224 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 GALNT2Q10471 571 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ITGADQ13349 1161 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 SEPT6Q14141 434 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 SPIDRQ14159 915 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 BTG3Q14201 252 aaPredicted RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 ZNF789Q5FWF6 425 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 C9orf57Q5W0N0 161 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 CTU1Q7Z7A3 348 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 SLC15A3Q8IY34 581 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ADGRG5Q8IZF4 528 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 NT5C3BQ969T7 300 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ROPN1LQ96C74 230 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 HDAC11Q96DB2 347 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 OLFM1Q99784 485 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ADAMTS10Q9H324 1103 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 ZFYVE28Q9HCC9 887 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 PDGFCQ9NRA1 345 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 MRPL42Q9Y6G3 142 aaKnown RBP14.03□□□□□ -0.16
APOB-202ENST00000399256 V9GYQ6 96 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 C1orf232A0A0U1RR37 186 aa14.03□□□□□ -0.16
APOB-202ENST00000399256 AQP12BA6NM10 295 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms