RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 EPHB2P29323 1055 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 EIF4A3P38919 411 aaKnown RBP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 NSFP46459 744 aaKnown RBP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 THOP1P52888 689 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 RHOAP61586 193 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 RAD51Q06609 339 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 PTK2BQ14289 1009 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 SYCP1Q15431 976 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 KLHL40Q2TBA0 621 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 CT47A1Q5JQC4 288 aaPredicted RBP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 EFHC2Q5JST6 749 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 FKBP15Q5T1M5 1219 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 ARHGAP40Q5TG30 622 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 FAXCQ5TGI0 409 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 FOXR1Q6PIV2 292 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 PCSK4Q6UW60 755 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 SLC35F3Q8IY50 421 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 PHACTR4Q8IZ21 702 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 LSMEM2Q8N112 164 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 RTL3Q8N8U3 475 aaKnown RBP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 TP53I13Q8NBR0 393 aaPredicted RBP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 BTN2A2Q8WVV5 523 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 NTAN1Q96AB6 310 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 ARHGEF26Q96DR7 871 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 VCPIP1Q96JH7 1222 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 EXOC2Q96KP1 924 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 GDAP1L1Q96MZ0 367 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 LRRC61Q9BV99 259 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 BOCQ9BWV1 1114 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 CLPBQ9H078 707 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 ASCL3Q9NQ33 180 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 FANCLQ9NW38 375 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 SALL4Q9UJQ4 1053 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 ENTPD2Q9Y5L3 495 aa9.91□□□□□ -0.82
NIFKP1-201ENST00000398317 TEX51A0A1B0GUA7 166 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 ZSCAN5CA6NGD5 496 aaPredicted RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 SIGLEC16A6NMB1 481 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 LMO7DNF2Z398 122 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 TPP1O14773 563 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 YY2O15391 372 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 KLK10O43240 276 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 CALB1P05937 261 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 ANXA6P08133 673 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 TSHRP16473 764 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 XPAP23025 273 aaPredicted RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 COPB1P53618 953 aaKnown RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 GSCP56915 257 aaPredicted RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 ERVPABLB-1P60509 514 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 RPL7AP62424 266 aaKnown RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 SERINC3Q13530 473 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 IRF4Q15306 451 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 CYTH1Q15438 398 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 BROXQ5VW32 411 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 DNAJC24Q6P3W2 148 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 MACC1Q6ZN28 852 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 RBM44Q6ZP01 1051 aaKnown RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 MON1BQ7L1V2 547 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 PHF13Q86YI8 300 aaPredicted RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 C3orf20Q8ND61 904 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 KCNE4Q8WWG9 221 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 TSACCQ96A04 125 aaPredicted RBP9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 MCEEQ96PE7 176 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 NCAPGQ9BPX3 1015 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 SLC13A1Q9BZW2 595 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 SYNDIG1Q9H7V2 258 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 LMBRD1Q9NUN5 540 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 NCKIPSDQ9NZQ3 722 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 SIRPGQ9P1W8 387 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 GULP1Q9UBP9 304 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 LHX3Q9UBR4 397 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 FZD10Q9ULW2 581 aa9.9□□□□□ -0.82
NIFKP1-201ENST00000398317 TENM4Q6N022 2769 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 TCRBV5S1A1TA0A578 114 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 J3KR12 359 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 PRKCGP05129 697 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 RBMS1P29558 406 aaKnown RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 ZNF143P52747 638 aaPredicted RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 TMPRSS3P57727 454 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 YBEYP58557 167 aaPredicted RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 YPEL5P62699 121 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 OGDHQ02218 1023 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 PPARDQ03181 441 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 LRRC14Q15048 493 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 WSCD2Q2TBF2 565 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 TMEM52BQ4KMG9 183 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 TAF1BQ53T94 588 aaPredicted RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 INO80DQ53TQ3 878 aaPredicted RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 ENPP7Q6UWV6 458 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 RD3Q7Z3Z2 195 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 HID1Q8IV36 788 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 ZNF843Q8N446 348 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 CASKIN2Q8WXE0 1202 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 PRR11Q96HE9 360 aaPredicted RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 CELF6Q96J87 481 aaKnown RBP9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 SLC46A1Q96NT5 459 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 AGPAT1Q99943 283 aa9.89□□□□□ -0.83
NIFKP1-201ENST00000398317 CCDC3Q9BQI4 270 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms