RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 SLC25A41Q8N5S1 370 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 MYEOVQ96EZ4 313 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 GPR78Q96P69 363 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 LYSMD1Q96S90 227 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 OMDQ99983 421 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TMEM216Q9P0N5 145 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 SLC39A10Q9ULF5 831 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 H3BMM5 538 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ZNF197O14709 1029 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TMCC1O94876 653 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ARF5P84085 180 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 HERC3Q15034 1050 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 HECTD2Q5U5R9 776 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TTC23LQ6PF05 361 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 C10orf107Q8IVU9 208 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 SLCO1B3Q9NPD5 702 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 RUVBL2Q9Y230 463 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 STK38LQ9Y2H1 464 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 PCDHB1Q9Y5F3 818 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 GRM6O15303 877 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 IGSF6O95976 241 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CNPP09543 421 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 LPOP22079 712 aaPredicted RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CHRNA4P43681 627 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TTPAP49638 278 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 NUMBP49757 651 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 OLIG2Q13516 323 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CTC1Q2NKJ3 1217 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 RFWD3Q6PCD5 774 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 PIWIL4Q7Z3Z4 852 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CLNKQ7Z7G1 428 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 SLC41A1Q8IVJ1 513 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 MRPL43Q8N983 215 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 SLC22A17Q8WUG5 538 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 UBXN10Q96LJ8 280 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TTC1Q99614 292 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 APOL2Q9BQE5 337 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TLR9Q9NR96 1032 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TMEM45AQ9NWC5 275 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 RAI2Q9Y5P3 530 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CPQQ9Y646 472 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 A0A0D9SEW6 157 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TRPC5OSA6NMA1 111 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 HTRA2O43464 458 aaPredicted RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 NFKBIAP25963 317 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ITGB8P26012 769 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 GABRB3P28472 473 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 LIG3P49916 1009 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CACNG1Q06432 222 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CDH18Q13634 790 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 EPGNQ6UW88 154 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CERS6Q6ZMG9 384 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CIR1Q86X95 450 aaPredicted RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CARNMT1Q8N4J0 409 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CPSF7Q8N684 471 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 OR7D4Q8NG98 312 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ANKRD27Q96NW4 1050 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 SORT1Q99523 831 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TRIM56Q9BRZ2 755 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CCDC106Q9BWC9 280 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TASP1Q9H6P5 420 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TAGLN3Q9UI15 199 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 CAPN14A8MX76 684 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 LEFTY2O00292 366 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 AOC1P19801 751 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 GABRR2P28476 465 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 STC1P52823 247 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 MTM1Q13496 603 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ITGA9Q13797 1035 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 PCSK7Q16549 785 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 DNAL1Q4LDG9 190 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TECRLQ5HYJ1 363 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 METTL2BQ6P1Q9 378 aaKnown RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 WFIKKN2Q8TEU8 576 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ULK4Q96C45 1275 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ERP27Q96DN0 273 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 DERL2Q9GZP9 239 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 ILKAPQ9H0C8 392 aaPredicted RBP7.41□□□□□ -1.22
RGPD1-201ENST00000398193 NOD2Q9HC29 1040 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 VWA7Q9Y334 891 aa7.41□□□□□ -1.22
RGPD1-201ENST00000398193 WDR91A4D1P6 747 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 WASH3PC4AMC7 463 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 MUSKO15146 869 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 PGLSO95336 258 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 GOT2P00505 430 aaKnown RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 C8AP07357 584 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 ELF3P78545 371 aaPredicted RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 TXNDC11Q6PKC3 985 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 KLHL23Q8NBE8 558 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 MYO19Q96H55 970 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 AARSD1Q9BTE6 412 aaKnown RBP7.4□□□□□ -1.22
RGPD1-201ENST00000398193 OBP2AQ9NY56 170 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 SLC2A6Q9UGQ3 507 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 SLC25A13Q9UJS0 675 aa7.4□□□□□ -1.22
RGPD1-201ENST00000398193 SLC4A7Q9Y6M7 1214 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms