RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 SPATC1Q76KD6 591 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 ATXN2LQ8WWM7 1075 aaKnown RBP12.86□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF556Q9HAH1 456 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 MAU2Q9Y6X3 613 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 APOC3P02656 99 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 GPC1P35052 558 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 AVPI1Q5T686 147 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 ARL8AQ96BM9 186 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 CERS4Q9HA82 394 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 LATS2Q9NRM7 1088 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 SLC45A1Q9Y2W3 748 aa12.86□□□□□ -0.35
CCBE1-201ENST00000398179 CDK1P06493 297 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 POLD2P49005 469 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 HNMTP50135 292 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 RAB31Q13636 194 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 FOXR2Q6PJQ5 311 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 LRRTM3Q86VH5 581 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TRAPPC5Q8IUR0 188 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 MEIOBQ8N635 442 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 LINC00301Q8NCQ3 95 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CCNYQ8ND76 341 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 C9orf16Q9BUW7 83 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 VAPAQ9P0L0 249 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CYB5R1Q9UHQ9 305 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF705FA8MVS1 300 aaPredicted RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 MIF4GDA9UHW6 222 aaKnown RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SLC30A4O14863 429 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF705DP0CH99 300 aaPredicted RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 ZNF705BP0CI00 300 aaPredicted RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CALCBP10092 127 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 NR4A1P22736 598 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SYTL3Q4VX76 610 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 MROH9Q5TGP6 573 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 DENND1BQ6P3S1 775 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TUSC5Q8IXB3 177 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SLC24A4Q8NFF2 622 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 PIF1Q9H611 641 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 FAM135BQ49AJ0 1406 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 KANTRA0A1W2PQU2 76 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 FUOMA2VDF0 154 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 A8MX80 341 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 FADDQ13158 208 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 STILQ15468 1287 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 IL23RQ5VWK5 629 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 COX15Q7KZN9 410 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 DHFR2Q86XF0 187 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 KCTD6Q8NC69 237 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 MOSPD2Q8NHP6 518 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 AP2M1Q96CW1 435 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CBWD1Q9BRT8 395 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 POLR1EQ9GZS1 481 aaKnown RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SMPD4Q9NXE4 827 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 PCDHGA5Q9Y5G8 931 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 FCHO1O14526 889 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CLIC2O15247 247 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 VAPBO95292 243 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CYP2D6P10635 497 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 HTR7P34969 479 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CDH4P55283 916 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 ARPINQ7Z6K5 226 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 COLGALT1Q8NBJ5 622 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 OR2L2Q8NH16 312 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TNFAIP8L1Q8WVP5 186 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SEC14L1Q92503 715 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 BIRC8Q96P09 236 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 CDK5RAP1Q96SZ6 601 aaKnown RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 PTGES3LE9PB15 166 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SLC9A3R1O14745 358 aaPredicted RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TOM1O60784 492 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SOAT1P35610 550 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 MAGEB1P43366 347 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 KLF10Q13118 480 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 LSAMPQ13449 338 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TCTE1Q5JU00 501 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 ITIH5Q86UX2 942 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SPATA22Q8NHS9 363 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 TRPM4Q8TD43 1214 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 ZIM3Q96PE6 472 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 C17orf62Q9BQA9 187 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SLCO1B3Q9NPD5 702 aa12.85□□□□□ -0.35
CCBE1-201ENST00000398179 SOAT2O75908 522 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 MZF1P28698 734 aaPredicted RBP12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PCGF2P35227 344 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 CCR9P51686 369 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 CDK16Q00536 496 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 ETV3LQ6ZN32 361 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 PCDH19Q8TAB3 1148 aa12.84□□□□□ -0.35
CCBE1-201ENST00000398179 RAD9AQ99638 391 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms