RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 CASQ1P31415 396 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 STIP1P31948 543 aaKnown RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 LIG3P49916 1009 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 WNT3AP56704 352 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 CDK18Q07002 472 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 RALGDSQ12967 914 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 TMEM52BQ4KMG9 183 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 DRICH1Q6PGQ1 229 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 KDELC1Q6UW63 502 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 NYAP1Q6ZVC0 841 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 DPPA4Q7L190 304 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 GLIS1Q8NBF1 620 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 IPMKQ8NFU5 416 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 RMDN1Q96DB5 314 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 IFT43Q96FT9 208 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 SCRN2Q96FV2 425 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 TRIB3Q96RU7 358 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 SLC17A9Q9BYT1 436 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 ZNF292O60281 2723 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 RALGAPA1Q6GYQ0 2036 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 WNT9AO14904 365 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 METTL18O95568 372 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 PAK4O96013 591 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 HNF1BP35680 557 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 SETMARQ53H47 684 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 FAXCQ5TGI0 409 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 TCEAL6Q6IPX3 200 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 USP45Q70EL2 814 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 C1orf216Q8TAB5 229 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 TCEAL3Q969E4 200 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 RTP4Q96DX8 246 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 FAM122AQ96E09 287 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 SERAC1Q96JX3 654 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 SLC6A18Q96N87 628 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 MLPHQ9BV36 600 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 HOMER3Q9NSC5 361 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 CA5BQ9Y2D0 317 aa25.48■■□□□ 1.67
TMEM55B-202ENST00000398020 A0A0J9YYE9 177 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 TRBC1P01850 177 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 SLC14A2Q15849 920 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 QPCTQ16769 361 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 PEAR1Q5VY43 1037 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 TTC27Q6P3X3 843 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 LAYNQ6UX15 382 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 GSTA5Q7RTV2 222 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 TSPAN33Q86UF1 283 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 CREG2Q8IUH2 290 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 MRGPRX2Q96LB1 330 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 MCCC1Q96RQ3 725 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 ADGRE3Q9BY15 652 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 TM9SF3Q9HD45 589 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 VPS45Q9NRW7 570 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 DRG1Q9Y295 367 aaKnown RBP25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 LRRK1Q38SD2 2015 aa25.47■■□□□ 1.67
TMEM55B-202ENST00000398020 BCAT2O15382 392 aaPredicted RBP25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 CFIP05156 583 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 ELFN1P0C7U0 828 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 ZSCAN5DPP0CG00 497 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 C6P13671 934 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 LHCGRP22888 699 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 SGCGQ13326 291 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 P3H1Q32P28 736 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 PLA2G2CQ5R387 149 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 DENND2CQ68D51 928 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 CCDC89Q8N998 374 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 MAGOHBQ96A72 148 aaKnown RBP25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 C1QTNF2Q9BXJ5 285 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 PARD6AQ9NPB6 346 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 FSCN3Q9NQT6 498 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 PPIL1Q9Y3C6 166 aa25.46■■□□□ 1.67
TMEM55B-202ENST00000398020 ANKRD66B4E2M5 251 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 ANXA9O76027 345 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 PIRTP0C851 137 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 GNSP15586 552 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 VIPR1P32241 457 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 GRIA4P48058 902 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 RPL26P61254 145 aaKnown RBP25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 MPP3Q13368 585 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 OLIG2Q13516 323 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 PRPSAP1Q14558 356 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 LIPIQ6XZB0 460 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 NDUFAF2Q8N183 169 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 AASDHPPTQ9NRN7 309 aa25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 TPX2Q9ULW0 747 aaKnown RBP25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 RPL26L1Q9UNX3 145 aaKnown RBP25.45■■□□□ 1.67
TMEM55B-202ENST00000398020 CAPN8A6NHC0 703 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 RAD51BO15315 384 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 TM7SF2O76062 418 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 CYP2A6P11509 494 aaPredicted RBP25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 PLA2G5P39877 138 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 CHRNA4P43681 627 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 GEMP55040 296 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 SF3A2Q15428 464 aaKnown RBP25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 CNGA3Q16281 694 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 PARP6Q2NL67 630 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 TRIM61Q5EBN2 209 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 SLC25A41Q8N5S1 370 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 FSD1LQ9BXM9 530 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 SEMA4GQ9NTN9 838 aa25.45■■□□□ 1.66
TMEM55B-202ENST00000398020 SUSD2Q9UGT4 822 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms