RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 ZSWIM9Q86XI8 627 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 CNTN4Q8IWV2 1026 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 CYP4X1Q8N118 509 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 PPM1NQ8N819 430 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 BLOC1S5Q8TDH9 187 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 PDCD6IPQ8WUM4 868 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 CDKL2Q92772 493 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 SRPK1Q96SB4 655 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 C19orf43Q9BQ61 176 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC2A6Q9UGQ3 507 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 LRRK1Q38SD2 2015 aa19.57■□□□□ 0.72
PDLIM2-205ENST00000397761 EDDM13A0A1B0GTR0 161 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 CRTAMO95727 393 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 ERVK-10P10266 1014 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 CHRM1P11229 460 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 HNRNPLP14866 589 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 PAMP19021 973 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC8A1P32418 973 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 CTHP32929 405 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 SOX9P48436 509 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 ZNF140P52738 457 aaPredicted RBP19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 KCTD16Q68DU8 428 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 NUDT18Q6ZVK8 323 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 CTAGE3PQ8IX95 158 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 CNPY4Q8N129 248 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 TTC30BQ8N4P2 665 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 MDGA1Q8NFP4 955 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 HCAR2Q8TDS4 363 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 MZB1Q8WU39 189 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 STYXQ8WUJ0 223 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 LYSMD1Q96S90 227 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 P2RY13Q9BPV8 354 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 OSBPL1AQ9BXW6 950 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 TRABDQ9H4I3 376 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 ZDHHC6Q9H6R6 413 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 FBRSL1Q9HCM7 1045 aaKnown RBP19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 LIMD1Q9UGP4 676 aa19.56■□□□□ 0.72
PDLIM2-205ENST00000397761 SLC7A4O43246 635 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 INHBAP08476 426 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 PIRTP0C851 137 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 ATP5DP30049 168 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 TNFRSF4P43489 277 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 GALK1P51570 392 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 E2F5Q15329 346 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 FNDC3BQ53EP0 1204 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 TEDDM1Q5T9Z0 273 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 EMC10Q5UCC4 262 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 GDPD4Q6W3E5 623 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 RALGPS2Q86X27 583 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 SMIM14Q96QK8 99 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 MCCC1Q96RQ3 725 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 MCMBPQ9BTE3 642 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 C20orf96Q9NUD7 363 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 NLE1Q9NVX2 485 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 ZFATQ9P243 1243 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 DKK3Q9UBP4 350 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 PHTF1Q9UMS5 762 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 NOVA2Q9UNW9 492 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 KCTD3Q9Y597 815 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 ARL5AQ9Y689 179 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 TTC28Q96AY4 2481 aa19.55■□□□□ 0.72
PDLIM2-205ENST00000397761 CCDC78A2IDD5 438 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 CAPN8A6NHC0 703 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 SPECC1L-ADORA2AF8WAN1 911 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 AURKAO14965 403 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 NPC1O15118 1278 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 BNIP3LO60238 219 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 UGT1A9O60656 530 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 FAM155BO75949 473 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 VAPBO95292 243 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 UGT2B4P06133 528 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 CTSLP07711 333 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 BMP1P13497 986 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 EPHB1P54762 984 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 PDE1BQ01064 536 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 TMED2Q15363 201 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 CDKN3Q16667 212 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 SKIDA1Q1XH10 827 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 HSP90AA5PQ58FG0 334 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 C9orf64Q5T6V5 341 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 BRAT1Q6PJG6 821 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 TRABD2AQ86V40 505 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 RASSF3Q86WH2 238 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 EZH1Q92800 747 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 MTG2Q9H4K7 406 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 UGT1A7Q9HAW7 530 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 UGT1A10Q9HAW8 530 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 UGT1A8Q9HAW9 530 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 IL1RAPL1Q9NZN1 696 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 BCCIPQ9P287 314 aaKnown RBP eCLIP19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 IL36AQ9UHA7 158 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 TBK1Q9UHD2 729 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 ACTL7BQ9Y614 415 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 PSAT1Q9Y617 370 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 IKBKGQ9Y6K9 419 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 LPOP22079 712 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 SERPINB9P50453 376 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 ARSDP51689 593 aa19.54■□□□□ 0.72
PDLIM2-205ENST00000397761 MAGOHP61326 146 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms