RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SLC44A1Q8WWI5 657 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 FEM1CQ96JP0 617 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 GUCD1Q96NT3 240 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 IL22Q9GZX6 179 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 MYLK2Q9H1R3 596 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 TNKS2Q9H2K2 1166 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 ARNT2Q9HBZ2 717 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 GEMIN8Q9NWZ8 242 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 SLCO3A1Q9UIG8 710 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 ERVW-1Q9UQF0 538 aa19.46■□□□□ 0.71
PDLIM2-204ENST00000397760 DENND4AQ7Z401 1863 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 C2CD4DB7Z1M9 353 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 ATP5BP06576 529 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 SLC18A2Q05940 514 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 MESP2Q0VG99 397 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 ITPRIPL2Q3MIP1 535 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 ACCSLQ4AC99 568 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 RALGPS1Q5JS13 557 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 CCNJLQ8IV13 435 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 GIMAP7Q8NHV1 300 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 CYB5D2Q8WUJ1 264 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 SORCS1Q8WY21 1168 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 ISG20Q96AZ6 181 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 MYCBPQ99417 103 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 TRIM56Q9BRZ2 755 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 TUBB6Q9BUF5 446 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 BRD9Q9H8M2 597 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 IKBKGQ9Y6K9 419 aa19.45■□□□□ 0.7
PDLIM2-204ENST00000397760 ARNTLO00327 626 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 TGDSO95455 350 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 EPOP01588 193 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 DHRS4L1P0CG22 281 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 CSNK1DP48730 415 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 AP1S1P61966 158 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 KDSRQ06136 332 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 DLG2Q15700 870 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 C22orf39Q6P5X5 142 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 UNC5AQ6ZN44 842 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 OTOAQ7RTW8 1153 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 DEFB123Q8N688 67 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 HLA-CQ95604 372 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ERP27Q96DN0 273 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ANKRD27Q96NW4 1050 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 NAT9Q9BTE0 207 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 CEP44Q9C0F1 390 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 SLCO1B3Q9NPD5 702 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 NOP53Q9NZM5 478 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ZNF180Q9UJW8 692 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 PCDHGC4Q9Y5F7 938 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 RAI2Q9Y5P3 530 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 IGSF6O95976 241 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 MT-ND3P03897 115 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ASLP04424 464 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 DLDP09622 509 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ATXN1LP0C7T5 689 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 PGAM1P18669 254 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 NNMTP40261 264 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 OPRD1P41143 372 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 SIRPB2Q5JXA9 342 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 OR2AP1Q8NGE2 309 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 OR6K2Q8NGY2 324 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 MRGPRX3Q96LB0 322 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 TDRD1Q9BXT4 1180 aaKnown RBP19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 PLAC1Q9HBJ0 212 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ELOVL2Q9NXB9 296 aa19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 EVLQ9UI08 416 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 ARIH1Q9Y4X5 557 aaPredicted RBP19.44■□□□□ 0.7
PDLIM2-204ENST00000397760 MAGEB16A2A368 324 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 PRRT4C9JH25 899 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 HLA-DPA1P20036 260 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 SNRPD1P62314 119 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 POU6F1Q14863 301 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 NAIF1Q69YI7 327 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 PHTF2Q8N3S3 785 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 RYBPQ8N488 228 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 PCDH20Q8N6Y1 951 aaKnown RBP19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 TCP10LQ8TDR4 215 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 AGAP11Q8TF27 550 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 SPOCK2Q92563 424 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 NXPE3Q969Y0 559 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 APOPT1Q96IL0 206 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 TRIB3Q96RU7 358 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 LNPEPQ9UIQ6 1025 aa19.43■□□□□ 0.7
PDLIM2-204ENST00000397760 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 NDST3O95803 873 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 SRPRAP08240 638 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 INHBAP08476 426 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 MAPK8P45983 427 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 NEK3P51956 506 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 CCNG1P51959 295 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 TRAF2Q12933 501 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 GALNT3Q14435 633 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 EFTUD2Q15029 972 aaKnown RBP eCLIP19.42■□□□□ 0.76e-8■■■■□ 20.2
PDLIM2-204ENST00000397760 AAK1Q2M2I8 961 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 PCID2Q5JVF3 399 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 STEAP4Q687X5 459 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 CFAP61Q8NHU2 1237 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 GSDMBQ8TAX9 411 aa19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 PHF7Q9BWX1 381 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-204ENST00000397760 MANSC1Q9H8J5 431 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms