RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 DLG3Q92796 817 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 COG8Q96MW5 612 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ZNF641Q96N77 438 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 LENG8Q96PV6 779 aaPredicted RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 TMEM79Q9BSE2 394 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 TINF2Q9BSI4 451 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CENPOQ9BU64 300 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ADAMTS10Q9H324 1103 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 STN1Q9H668 368 aaKnown RBP5.06□□□□□ -1.6
SSR1-202ENST00000397511 MARCH7Q9H992 704 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CXorf21Q9HAI6 301 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CYP4F12Q9HCS2 524 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 ANKMY1Q9P2S6 941 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 OR12D3Q9UGF7 316 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 CDC14AQ9UNH5 594 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 USP3Q9Y6I4 520 aa5.06□□□□□ -1.6
SSR1-202ENST00000397511 C1orf232A0A0U1RR37 186 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PSMD11O00231 422 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PIRO00625 290 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 UBL4AP11441 157 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ENO3P13929 434 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 HNRNPLP14866 589 aaKnown RBP eCLIP5.05□□□□□ -1.6
SSR1-202ENST00000397511 DARSP14868 501 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 PRKACBP22694 351 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CD68P34810 354 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 CHRNA4P43681 627 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ACADSBP45954 432 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ABCE1P61221 599 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 CCNA1P78396 465 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 MPP1Q00013 466 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 NIPAL4Q0D2K0 466 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PPIL2Q13356 520 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TUBB3Q13509 450 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 DPYSQ14117 519 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 USP10Q14694 798 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 GRM3Q14832 879 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SPCS2Q15005 226 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SNX17Q15036 470 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ZBTB6Q15916 424 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PLEKHG6Q3KR16 790 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 LSM12Q3MHD2 195 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 FBXO48Q5FWF7 155 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 AARS2Q5JTZ9 985 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 ANKRD26P1Q6NSI1 321 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 LDB1Q86U70 411 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 KCNMB4Q86W47 210 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 HEATR4Q86WZ0 1026 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CARM1Q86X55 608 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 FAM20CQ8IXL6 584 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TDRD5Q8NAT2 981 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 C3orf58Q8NDZ4 430 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 KCTD4Q8WVF5 259 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CENPIQ92674 756 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 LRRC39Q96DD0 335 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TMA16Q96EY4 203 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 TNIP3Q96KP6 325 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 C11orf84Q9BUA3 381 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 DUSP16Q9BY84 665 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 FAM96AQ9H5X1 160 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 WDCPQ9H6R7 721 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ZFYVE28Q9HCC9 887 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CHST12Q9NRB3 414 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 NDFIP2Q9NV92 336 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 RIC8BQ9NVN3 520 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 BFARQ9NZS9 450 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 MORF4L1Q9UBU8 362 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 DCDC2Q9UHG0 476 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SFMBT1Q9UHJ3 866 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PTBP2Q9UKA9 531 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 MTF2Q9Y483 593 aaPredicted RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 CPQQ9Y646 472 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TLL2Q9Y6L7 1015 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 BRCA1P38398 1863 aaKnown RBP5.05□□□□□ -1.6
SSR1-202ENST00000397511 LOC105371267A0A1B0GV96 52 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 RGS13O14921 159 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 AURKAO14965 403 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CRYZL1O95825 349 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SERPINE1P05121 402 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 YBX3P16989 372 aaKnown RBP eCLIP5.05□□□□□ -1.62e-9■□□□□ 9.8
SSR1-202ENST00000397511 DCKP27707 260 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 EPHX2P34913 555 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 NOS2P35228 1153 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ADRA1BP35368 520 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 GP5P40197 560 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PGFP49763 221 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SERPINB9P50453 376 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 CDH15P55291 814 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TPTEP56180 551 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SNX16P57768 344 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 MAXP61244 160 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 GNA12Q03113 381 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 ITKQ08881 620 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 TRAF2Q12933 501 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 PTK2BQ14289 1009 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 DCAF4L1Q3SXM0 396 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 DUSP28Q4G0W2 176 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 FGD3Q5JSP0 725 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 SDHAF4Q5VUM1 108 aa5.05□□□□□ -1.6
SSR1-202ENST00000397511 GPR107Q5VW38 600 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms