RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ARCN1P48444 511 aaKnown RBP27.62■■■□□ 2.01
CPNE1-203ENST00000397442 TTMPQ5BVD1 217 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 ARSIQ5FYB1 569 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 ZNF449Q6P9G9 518 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 TDRPQ86YL5 185 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 KLHL32Q96NJ5 620 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 PAFAH2Q99487 392 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 CACNA2D2Q9NY47 1150 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 SLC24A2Q9UI40 661 aa27.62■■■□□ 2.01
CPNE1-203ENST00000397442 ALPIP09923 528 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 ERVK-10P10266 1014 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 CTPS1P17812 591 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 PON2Q15165 354 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 SMAD1Q15797 465 aaKnown RBP27.61■■■□□ 2.01
CPNE1-203ENST00000397442 TMEM196Q5HYL7 178 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 FSTL4Q6MZW2 842 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 NLRP9Q7RTR0 991 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 CROCCP2Q86T23 111 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 STK40Q8N2I9 435 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 MAFAQ8NHW3 353 aaPredicted RBP27.61■■■□□ 2.01
CPNE1-203ENST00000397442 SLC44A1Q8WWI5 657 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 LRIG1Q96JA1 1093 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 PPCSQ9HAB8 311 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 MAGEE1Q9HCI5 957 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 SLC2A4RGQ9NR83 387 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 PPIL1Q9Y3C6 166 aa27.61■■■□□ 2.01
CPNE1-203ENST00000397442 BPTFQ12830 3046 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 CDH16O75309 829 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 ACVR1Q04771 509 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 MGAT5Q09328 741 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 GPS2Q13227 327 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 TDGQ13569 410 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 RASA2Q15283 850 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 TAF1AQ15573 450 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-203ENST00000397442 KIAA0930Q6ICG6 404 aaPredicted RBP27.6■■■□□ 2.01
CPNE1-203ENST00000397442 GLT6D1Q7Z4J2 308 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 TTC30BQ8N4P2 665 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 DCAKDQ8WVC6 231 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 MRRFQ96E11 262 aaKnown RBP27.6■■■□□ 2.01
CPNE1-203ENST00000397442 PGM2Q96G03 612 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 SLC17A6Q9P2U8 582 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 LGALS13Q9UHV8 139 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 RIMKLBQ9ULI2 386 aa27.6■■■□□ 2.01
CPNE1-203ENST00000397442 A0A0U1RQS6 177 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 TSPAN11A1L157 253 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 GOLGA6L10A6NI86 522 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 BUD23O43709 281 aaKnown RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 UGT1A9O60656 530 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 SRFP11831 508 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 ZNF140P52738 457 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 LAMB3Q13751 1172 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PTPRCAPQ14761 206 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 TNFAIP8L3Q5GJ75 292 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 MTERF4Q7Z6M4 381 aaKnown RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 LRRC6Q86X45 466 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PPM1NQ8N819 430 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 ZNF513Q8N8E2 541 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PEX13Q92968 403 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 FAM129BQ96TA1 746 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 OSBPL1AQ9BXW6 950 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 CENPHQ9H3R5 247 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 UGT1A7Q9HAW7 530 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 UGT1A10Q9HAW8 530 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 UGT1A8Q9HAW9 530 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PPANQ9NQ55 473 aaKnown RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 C20orf96Q9NUD7 363 aaPredicted RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 HACD3Q9P035 362 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PHTF1Q9UMS5 762 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 STON1Q9Y6Q2 735 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 VAPBO95292 243 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 CRTAMO95727 393 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 EGFP01133 1207 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PSMA3P25788 255 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 ARSDP51689 593 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PFKPQ01813 784 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 ELAVL3Q14576 367 aaKnown RBP27.59■■■□□ 2.01
CPNE1-203ENST00000397442 CDKN3Q16667 212 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 ADGRD1Q6QNK2 874 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 MICALCLQ6ZW33 695 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 KCNMB4Q86W47 210 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 CTAGE3PQ8IX95 158 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 CYP4X1Q8N118 509 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 GOLGA6L1Q8N7Z2 621 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 OR13C4Q8NGS5 318 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 PRSS16Q9NQE7 514 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 SARDHQ9UL12 918 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 ZNF711Q9Y462 761 aa27.59■■■□□ 2.01
CPNE1-203ENST00000397442 CAPN8A6NHC0 703 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 GLULP15104 373 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 HNF1BP35680 557 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 SEC13P55735 322 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 HSP90B2PQ58FF3 399 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 HSP90AA5PQ58FG0 334 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 PDPK2PQ6A1A2 396 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 BRAT1Q6PJG6 821 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 MARK2Q7KZI7 788 aaKnown RBP27.58■■■□□ 2.01
CPNE1-203ENST00000397442 EID2BQ96D98 161 aa27.58■■■□□ 2.01
CPNE1-203ENST00000397442 DNAJC1Q96KC8 554 aaKnown RBP27.58■■■□□ 2.01
CPNE1-203ENST00000397442 MCCC1Q96RQ3 725 aaPredicted RBP27.58■■■□□ 2.01
CPNE1-203ENST00000397442 LYSMD1Q96S90 227 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms