RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CYP8B1Q9UNU6 501 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 SHOC2Q9UQ13 582 aa23.71■■□□□ 1.39
TSPAN4-203ENST00000397397 CACNA1IQ9P0X4 2223 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 BHMG1C9JSJ3 638 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 SMAPO00193 183 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 SLC7A4O43246 635 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 ZNF217O75362 1048 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 PIRTP0C851 137 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 HOXA6P31267 233 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 SEMG2Q02383 582 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 DMWDQ09019 674 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 ELP6Q0PNE2 266 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 PTPRRQ15256 657 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 LRRC8BQ6P9F7 803 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 MAML2Q8IZL2 1156 aaPredicted RBP23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 SEC14L1Q92503 715 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 FAM131CQ96AQ9 280 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 SCRN2Q96FV2 425 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 FAM114A2Q9NRY5 505 aa23.7■■□□□ 1.38
TSPAN4-203ENST00000397397 CAPN8A6NHC0 703 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 CYP2A6P11509 494 aaPredicted RBP23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 TPH1P17752 444 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 HNF1BP35680 557 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 ZNF534Q76KX8 674 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 OR14C36Q8NHC7 312 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 MCCC1Q96RQ3 725 aaPredicted RBP23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 KCNH6Q9H252 994 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 B4GALT6Q9UBX8 382 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 ITM2BQ9Y287 266 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 FADS3Q9Y5Q0 445 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 WDFY4Q6ZS81 3184 aa23.69■■□□□ 1.38
TSPAN4-203ENST00000397397 A8MX80 341 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 NEMP1O14524 444 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 IGLV3-19P01714 112 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 TDGF1P13385 188 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 OXTRP30559 389 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 VIPR1P32241 457 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 PLTPP55058 493 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 TAS2R38P59533 333 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 TCF15Q12870 199 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 DPPA4Q7L190 304 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 CAND1Q86VP6 1230 aaKnown RBP23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 BLOC1S5Q8TDH9 187 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 RLN3Q8WXF3 142 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 UBXN4Q92575 508 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 ART4Q93070 314 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 SERPINB12Q96P63 405 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 XAB2Q9HCS7 855 aaKnown RBP23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 GGT7Q9UJ14 662 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 FBXO4Q9UKT5 387 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 SPO11Q9Y5K1 396 aa23.68■■□□□ 1.38
TSPAN4-203ENST00000397397 NPIPB15A6NHN6 443 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 AP3B1O00203 1094 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 AREL1O15033 823 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 TP73O15350 636 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 SPINT1O43278 529 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 PLRG1O43660 514 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 AP1G1O43747 822 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 MLNP12872 115 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 MMP12P39900 470 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 FNTBP49356 437 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 ADPRHP54922 357 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 SESN2P58004 480 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 CAV1Q03135 178 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 IFT20Q8IY31 132 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 IFT81Q8WYA0 676 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 SRPK1Q96SB4 655 aaKnown RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 BTBD1Q9H0C5 482 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 SGK2Q9HBY8 427 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 MAGEE1Q9HCI5 957 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 GDF3Q9NR23 364 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 V9GYY5 206 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 GALR2O43603 387 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 AVILO75366 819 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 ACSL1P33121 698 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 MTM1Q13496 603 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 MAP7D1Q3KQU3 841 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 CERCAMQ5T4B2 595 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 CRTC1Q6UUV9 634 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 ZDHHC24Q6UX98 284 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 TSPAN33Q86UF1 283 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 LYSMD1Q96S90 227 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 FRMD8Q9BZ67 464 aaPredicted RBP23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 EPC1Q9H2F5 836 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 HACD3Q9P035 362 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 INVSQ9Y283 1065 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 ZNF711Q9Y462 761 aa23.67■■□□□ 1.38
TSPAN4-203ENST00000397397 MYLKQ15746 1914 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 IGHV1OR15-9A0A0B4J2B8 117 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 CCDC163A0A0D9SF12 145 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 A0A0U1RQS6 177 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 FAM47DPA6NHR8 397 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 TSPAN6O43657 245 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 PCDH8O95206 1070 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 CD6P30203 668 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 NPY2RP49146 381 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 RALGDSQ12967 914 aa23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 MSLNQ13421 630 aaPredicted RBP23.66■■□□□ 1.38
TSPAN4-203ENST00000397397 ARHGEF7Q14155 803 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms