RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CD86P42081 329 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 SERPINH1P50454 418 aaKnown RBP13.36□□□□□ -0.27
SEC13-209ENST00000397117 PMS2P54278 862 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 RHOAP61586 193 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 ECT2LQ008S8 904 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 DSC2Q02487 901 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 PDIA2Q13087 525 aaKnown RBP13.36□□□□□ -0.27
SEC13-209ENST00000397117 MPP3Q13368 585 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 DNAJC21Q5F1R6 531 aaKnown RBP13.36□□□□□ -0.27
SEC13-209ENST00000397117 GRAMD4Q6IC98 578 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 NAPEPLDQ6IQ20 393 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 LINC00523Q86TU6 105 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 PGBD5Q8N414 524 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 WFIKKN2Q8TEU8 576 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 OXNAD1Q96HP4 312 aaPredicted RBP13.36□□□□□ -0.27
SEC13-209ENST00000397117 SERPINB12Q96P63 405 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 MGME1Q9BQP7 344 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 GORASP1Q9BQQ3 440 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 MLPHQ9BV36 600 aaPredicted RBP13.36□□□□□ -0.27
SEC13-209ENST00000397117 FSD1LQ9BXM9 530 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 PHACTR1Q9C0D0 580 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 PLXNB3Q9ULL4 1909 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 ITPR1Q14643 2758 aa13.36□□□□□ -0.27
SEC13-209ENST00000397117 AP3B1O00203 1094 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 TRIM24O15164 1050 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 PMPCBO75439 489 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 SUN1O94901 812 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 MT-CYBP00156 380 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 MT-CO1P00395 513 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CISD3P0C7P0 127 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CD59P13987 128 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 SCNN1BP51168 640 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 BBS9Q3SYG4 887 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 FNBP1LQ5T0N5 605 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 KCTD11Q693B1 232 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 LRRC8BQ6P9F7 803 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 SLC36A4Q6YBV0 504 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 KIAA0907Q7Z7F0 614 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 ADIPOR2Q86V24 386 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 ZBED8Q8IZ13 594 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 HDDC3Q8N4P3 179 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CHCHD4Q8N4Q1 142 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 MREGQ8N565 214 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 DEFB119Q8N690 84 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 UBLCP1Q8WVY7 318 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 GTPBP2Q9BX10 602 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 CD248Q9HCU0 757 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 SLC27A6Q9Y2P4 619 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 FCF1Q9Y324 198 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 TTC24A2A3L6 582 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 TBC1D3BA6NDS4 549 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 K7ERQ8 282 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 MUSKO15146 869 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 ATP8B1O43520 1251 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 AVILO75366 819 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CD160O95971 181 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 MLNP12872 115 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 NNMTP40261 264 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CTSOP43234 321 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 MAGEA4P43358 317 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 RPL6Q02878 288 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 NSUN2Q08J23 767 aaKnown RBP eCLIP13.35□□□□□ -0.27
SEC13-209ENST00000397117 NIPAL4Q0D2K0 466 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 MTM1Q13496 603 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CASP8Q14790 479 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 PCSK7Q16549 785 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 GEN1Q17RS7 908 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 PREPLQ4J6C6 727 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 RAB44Q7Z6P3 723 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 PRPF39Q86UA1 669 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 CAND1Q86VP6 1230 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 ZNF513Q8N8E2 541 aaPredicted RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 ARRDC2Q8TBH0 407 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 RPL10LQ96L21 214 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 TBL1YQ9BQ87 522 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 TXLNGYQ9BZA5 131 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 CIPCQ9C0C6 399 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
SEC13-209ENST00000397117 HS3ST2Q9Y278 367 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 STARD13Q9Y3M8 1113 aa13.35□□□□□ -0.27
SEC13-209ENST00000397117 WDFY3Q8IZQ1 3526 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 IGHV1OR15-9A0A0B4J2B8 117 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 ARHGAP33O14559 1287 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 INSIG1O15503 277 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 SMAD6O43541 496 aaKnown RBP13.34□□□□□ -0.27
SEC13-209ENST00000397117 USP12O75317 370 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 ASLP04424 464 aa13.34□□□□□ -0.27
SEC13-209ENST00000397117 GRIA1P42261 906 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms