RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 TRANK1O15050 2925 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 RNF103-CHMP3A0A140T963 221 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 FAM47E-STBD1D6RA91 191 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 K7ERI5 159 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 KPNA4O00629 521 aaPredicted RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TOR1BO14657 336 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 GRAP2O75791 330 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CCNA2P20248 432 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 EEF1B2P24534 225 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 OPRL1P41146 370 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 ERVK-21P61565 698 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 SNRPFP62306 86 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TRIM25Q14258 630 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 FAM219BQ5XKK7 198 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 LRRC8EQ6NSJ5 796 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 SCYL2Q6P3W7 929 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 RNF19BQ6ZMZ0 732 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 MRPL10Q7Z7H8 261 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CANT1Q8WVQ1 401 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 CAPSLQ8WWF8 208 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 ANKRD36BP1Q96IX9 119 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 ALPK1Q96QP1 1244 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 GATA5Q9BWX5 397 aaPredicted RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 FRMD8P1Q9BZ68 369 aaPredicted RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 SDCBP2Q9H190 292 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 RIC8BQ9NVN3 520 aa11.85□□□□□ -0.51
FGFR1-208ENST00000397108 UTP6Q9NYH9 597 aaKnown RBP11.85□□□□□ -0.51
FGFR1-208ENST00000397108 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 TCAF2A6NFQ2 919 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 H0YCG3 227 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 SAT1P21673 171 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 SOX11P35716 441 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 GATMP50440 423 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 RHDQ02161 417 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 GALNT2Q10471 571 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 SEL1L3Q68CR1 1132 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 SLC27A1Q6PCB7 646 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 NIPA2Q8N8Q9 360 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 SLC39A3Q9BRY0 314 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 ADI1Q9BV57 179 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 IMPG2Q9BZV3 1241 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 TIMM22Q9Y584 194 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 PRORSD1PA6NEY8 169 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 ZNF701M0R085 212 aaPredicted RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 TRUB2O95900 331 aaKnown RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 EDN1P05305 212 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 LINC00271P0C7V0 271 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 NCAM1P13591 858 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 MZF1P28698 734 aaPredicted RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 RAD23AP54725 363 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 GRIN2CQ14957 1233 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 STILQ15468 1287 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 C15orf59Q2T9L4 293 aaPredicted RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 CLLU1OSQ5K130 101 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 PRR23BQ6ZRT6 265 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 TAS1R3Q7RTX0 852 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 ASB9Q96DX5 294 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 GUCD1Q96NT3 240 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 UNKQ9C0B0 810 aaKnown RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 ILKAPQ9H0C8 392 aaPredicted RBP11.84□□□□□ -0.51
FGFR1-208ENST00000397108 PDZD7Q9H5P4 517 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 NANOGQ9H9S0 305 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 RSAD1Q9HA92 442 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 MOCS1Q9NZB8 636 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 TXNDC16Q9P2K2 825 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 KLQ9UEF7 1012 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 ZDHHC2Q9UIJ5 367 aa11.84□□□□□ -0.51
FGFR1-208ENST00000397108 DLGAP1O14490 977 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 SNAP91O60641 907 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 PIGNO95427 931 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 NEK2P51955 445 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 OXA1LQ15070 435 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 MAPK11Q15759 364 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 TAZQ16635 292 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 GLRA4Q5JXX5 417 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 TTC30AQ86WT1 665 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 PLD5Q8N7P1 536 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 CMASQ8NFW8 434 aaPredicted RBP11.83□□□□□ -0.52
FGFR1-208ENST00000397108 CASD1Q96PB1 797 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 SNX15Q9NRS6 342 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 VPS28Q9UK41 221 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 AGO2Q9UKV8 859 aaKnown RBP11.83□□□□□ -0.52
FGFR1-208ENST00000397108 PCDHGA7Q9Y5G6 932 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 COPG1Q9Y678 874 aaKnown RBP11.83□□□□□ -0.52
FGFR1-208ENST00000397108 MYO9BQ13459 2157 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 TBKBP1A7MCY6 615 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 HPCAL1P37235 193 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 NR4A2P43354 598 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 PTPN9P43378 593 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 MERTKQ12866 999 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 SPRED2Q7Z698 418 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 ABI1Q8IZP0 508 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 CLIP4Q8N3C7 705 aa11.83□□□□□ -0.52
FGFR1-208ENST00000397108 SMG8Q8ND04 991 aaKnown RBP11.83□□□□□ -0.52
FGFR1-208ENST00000397108 ZNF420Q8TAQ5 688 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms