RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 GTSE1Q9NYZ3 720 aa12.77□□□□□ -0.36
TRIM39-204ENST00000396548 PDE4DIPQ5VU43 2346 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 SLC7A4O43246 635 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 ALDOAP04075 364 aaKnown RBP12.77□□□□□ -0.37
TRIM39-204ENST00000396548 F7P08709 466 aaPredicted RBP12.77□□□□□ -0.37
TRIM39-204ENST00000396548 BRAFP15056 766 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 GP5P40197 560 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 SEPT6Q14141 434 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 PTPRCAPQ14761 206 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 MICALL1Q8N3F8 863 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 CPA6Q8N4T0 437 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 ARFGAP2Q8N6H7 521 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 CHST14Q8NCH0 376 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 GPR150Q8NGU9 434 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 BLOC1S5Q8TDH9 187 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 STYXQ8WUJ0 223 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 C19orf43Q9BQ61 176 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 ATP13A3Q9H7F0 1226 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 MKS1Q9NXB0 559 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 PCDHB9Q9Y5E1 797 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 TMEM120BA0PK00 339 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 GOLGA8TH3BQL2 631 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 KRT15P19012 456 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 KRT4P19013 534 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 CA4P22748 312 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 GBP2P32456 591 aaPredicted RBP12.77□□□□□ -0.37
TRIM39-204ENST00000396548 EIF2DP41214 584 aaKnown RBP12.77□□□□□ -0.37
TRIM39-204ENST00000396548 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
TRIM39-204ENST00000396548 CSE1LP55060 971 aaKnown RBP12.77□□□□□ -0.37
TRIM39-204ENST00000396548 BCL2L1Q07817 233 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 BMPR2Q13873 1038 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 GRAMD4Q6IC98 578 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 Q6ZVU0 165 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 PTPRN2Q92932 1015 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 LYSMD1Q96S90 227 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 CD207Q9UJ71 328 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 WASF2Q9Y6W5 498 aa12.77□□□□□ -0.37
TRIM39-204ENST00000396548 A0A0J9YYE9 177 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 TSPAN11A1L157 253 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 POP4O95707 220 aaKnown RBP12.76□□□□□ -0.37
TRIM39-204ENST00000396548 TRBC1P01850 177 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 AHSGP02765 367 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 ITGA2BP08514 1039 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 CHN1P15882 459 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 NEK3P51956 506 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 LIMK2P53671 638 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 SMAD1Q15797 465 aaKnown RBP12.76□□□□□ -0.37
TRIM39-204ENST00000396548 ARMC12Q5T9G4 340 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 STRA8Q7Z7C7 330 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 OR13C4Q8NGS5 318 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
TRIM39-204ENST00000396548 ZNF641Q96N77 438 aaPredicted RBP12.76□□□□□ -0.37
TRIM39-204ENST00000396548 DEC1Q9P2X7 70 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 NUMBLQ9Y6R0 609 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 MYO9BQ13459 2157 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 KRT37O76014 449 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 KRT38O76015 456 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 CTSLP07711 333 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 PAMP19021 973 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 SLC1A2P43004 574 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 ZC3HC1Q86WB0 502 aaKnown RBP12.76□□□□□ -0.37
TRIM39-204ENST00000396548 DENND6AQ8IWF6 608 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 C4orf33Q8N1A6 199 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 ACVR1CQ8NER5 493 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 RMDN1Q96DB5 314 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 NSMCE4AQ9NXX6 385 aa12.76□□□□□ -0.37
TRIM39-204ENST00000396548 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 TIMM44O43615 452 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 RPP40O75818 363 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CRTAMO95727 393 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 TERF2Q15554 542 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MROH9Q5TGP6 573 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MTSS1LQ765P7 747 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CNPY4Q8N129 248 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 HDAC10Q969S8 669 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 MCCC1Q96RQ3 725 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 SUV39H2Q9H5I1 410 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 H7C0S8 307 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CCL22O00626 93 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 GDI1P31150 447 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 ABL2P42684 1182 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 LEPRP48357 1165 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 GABPB1Q06547 395 aaPredicted RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 GRM3Q14832 879 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 EIF4HQ15056 248 aaKnown RBP12.75□□□□□ -0.37
TRIM39-204ENST00000396548 NEPROQ6NW34 567 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 GLT6D1Q7Z4J2 308 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CILP2Q8IUL8 1156 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 TERB1Q8NA31 727 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 TBATAQ96M53 351 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 FAM167BQ9BTA0 163 aa12.75□□□□□ -0.37
TRIM39-204ENST00000396548 CAPS2Q9BXY5 557 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms