RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ALG11Q2TAA5 492 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 TMCO3Q6UWJ1 677 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 FBXO39Q8N4B4 442 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 FNIP1Q8TF40 1166 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 PDCD6IPQ8WUM4 868 aaKnown RBP16.47■□□□□ 0.23
DDR1-229ENST00000396342 HIC2Q96JB3 615 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 ZNF599Q96NL3 588 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 SLC39A8Q9C0K1 460 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 TCEAL2Q9H3H9 227 aaPredicted RBP16.47■□□□□ 0.23
DDR1-229ENST00000396342 DPEP2Q9H4A9 486 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 WDR26Q9H7D7 661 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 SEPT10Q9P0V9 454 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 ENTPD2Q9Y5L3 495 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 U3KQA8 63 aa16.47■□□□□ 0.23
DDR1-229ENST00000396342 NYNRINQ9P2P1 1898 aaKnown RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 LRRC53A6NM62 1247 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 RECQL5O94762 991 aaPredicted RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 RPLP0P05388 317 aaKnown RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 ITGA2BP08514 1039 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 CYP2A6P11509 494 aaPredicted RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 ITIH2P19823 946 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 INHBCP55103 352 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 KIAA1024LP59773 190 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 LBRQ14739 615 aaKnown RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 AGERQ15109 404 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 TCEA2Q15560 299 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 BOLA3Q53S33 107 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 PERM1Q5SV97 790 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 TPRG1LQ5T0D9 272 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 PLEKHA7Q6IQ23 1121 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 CCDC81Q6ZN84 652 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 TSEN2Q8NCE0 465 aaKnown RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 FAM46DQ8NEK8 389 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 CCDC74AQ96AQ1 378 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 TMEM159Q96B96 161 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 WBP1Q96G27 269 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 BBC3Q96PG8 261 aaPredicted RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.46■□□□□ 0.23
DDR1-229ENST00000396342 SNRNP25Q9BV90 132 aaKnown RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 PHPT1Q9NRX4 125 aaPredicted RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 MYO1AQ9UBC5 1043 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 PCDHB11Q9Y5F2 797 aa16.46■□□□□ 0.23
DDR1-229ENST00000396342 BZW2Q9Y6E2 419 aaKnown RBP16.46■□□□□ 0.23
DDR1-229ENST00000396342 TCRBV5S1A1TA0A578 114 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 GOLGA6CA6NDK9 693 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 GOLGA6BA6NDN3 693 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 TMEM191CA6NGB0 347 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 TNFRSF10CO14798 259 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 PLD2O14939 933 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 TEX33O43247 280 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 GOLGA6DP0CG33 693 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 MIPP30301 263 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
DDR1-229ENST00000396342 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
DDR1-229ENST00000396342 CFHR1Q03591 330 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 ILF3Q12906 894 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDR1-229ENST00000396342 ZSCAN23Q3MJ62 389 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 TDRD12Q587J7 1177 aaKnown RBP16.45■□□□□ 0.22
DDR1-229ENST00000396342 TMEM164Q5U3C3 297 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 RAB11FIP2Q7L804 512 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 IRF2BP2Q7Z5L9 587 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 ATPAF2Q8N5M1 289 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 KYQ8NBH2 561 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 LIN37Q96GY3 246 aaPredicted RBP16.45■□□□□ 0.22
DDR1-229ENST00000396342 CLPBQ9H078 707 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 PDFQ9HBH1 243 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 GOLGA6AQ9NYA3 693 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 DGKBQ9Y6T7 804 aa16.45■□□□□ 0.22
DDR1-229ENST00000396342 SPEGQ15772 3267 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 A0A1W2PQC6 194 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
DDR1-229ENST00000396342 SOCS5O75159 536 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 CPP00450 1065 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 HOXC4P09017 264 aaPredicted RBP16.44■□□□□ 0.22
DDR1-229ENST00000396342 GLB1P16278 677 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 PCK1P35558 622 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 KRT81Q14533 505 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 ANO6Q4KMQ2 910 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 USP45Q70EL2 814 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 DPPA4Q7L190 304 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 CCNJLQ8IV13 435 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 Q8N9G6 341 aaPredicted RBP16.44■□□□□ 0.22
DDR1-229ENST00000396342 ZSCAN1Q8NBB4 408 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 NUS1Q96E22 293 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 PSKH2Q96QS6 385 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 KCTD15Q96SI1 283 aaPredicted RBP16.44■□□□□ 0.22
DDR1-229ENST00000396342 RBM15Q96T37 977 aaKnown RBP eCLIP16.44■□□□□ 0.22
DDR1-229ENST00000396342 CMKLR1Q99788 373 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 BPIFA3Q9BQP9 254 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 ANP32EQ9BTT0 268 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 GSDMCQ9BYG8 508 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 LRRN3Q9H3W5 708 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 CPNE5Q9HCH3 593 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 CYP4F12Q9HCS2 524 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 ASCL3Q9NQ33 180 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
DDR1-229ENST00000396342 TRPM6Q9BX84 2022 aa16.44■□□□□ 0.22
DDR1-229ENST00000396342 FREM2Q5SZK8 3169 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms