RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 KDELC2Q7Z4H8 507 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 SERINC5Q86VE9 423 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 AFAP1L2Q8N4X5 818 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 SPPL2BQ8TCT7 592 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 MIPOL1Q8TD10 442 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 HASPINQ8TF76 798 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 C1orf74Q96LT6 269 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 NPAS2Q99743 824 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 Q9H521 79 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 NOL6Q9H6R4 1146 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 SUDS3Q9H7L9 328 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 MEAF6Q9HAF1 191 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 EML4Q9HC35 981 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 MPP6Q9NZW5 540 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 GMEB1Q9Y692 573 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 C15orf38-AP3S2A0A0A6YYH1 394 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 A8MT66 165 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 STX16-NPEPL1H3BU86 382 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 DNAJA2O60884 412 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 PAPSS2O95340 614 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 RBP1P09455 135 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 LTA4HP09960 611 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 MSX2P35548 267 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 TUSC3Q13454 348 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 ZNF789Q5FWF6 425 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 ZNF280DQ6N043 979 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 ARPINQ7Z6K5 226 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 SPATA2LQ8IUW3 424 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 TSPAN17Q96FV3 270 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 IMP4Q96G21 291 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 SUSD3Q96L08 255 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 SERPINB11Q96P15 392 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 MRPL1Q9BYD6 325 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 TTC3P53804 2025 aa16.07■□□□□ 0.16
CCHCR1-202ENST00000396263 TRIM38O00635 465 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 TYMPP19971 482 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 KCNA5P22460 613 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 GRIK1P39086 918 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 SERPINH1P50454 418 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 CLCN2P51788 898 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 NKX3-2P78367 333 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 SQLEQ14534 574 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 MAPRE2Q15555 327 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 PCSK7Q16549 785 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 NOMO2Q5JPE7 1267 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 KLC3Q6P597 504 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 GK5Q6ZS86 529 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 UMODL1-AS1Q8N2C9 162 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 TMA16Q96EY4 203 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 UBXN10Q96LJ8 280 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 UROC1Q96N76 676 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 NMUR1Q9HB89 426 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 VPS45Q9NRW7 570 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 ARHGEF37A1IGU5 675 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 MGEA5O60502 916 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 RENBPP51606 427 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 PTK2BQ14289 1009 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 ACAP2Q15057 778 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 CUZD1Q86UP6 607 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 RNF148Q8N7C7 305 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 OR13J1Q8NGT2 312 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 ASB9Q96DX5 294 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 COPS7BQ9H9Q2 264 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 SPC25Q9HBM1 224 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 SARDHQ9UL12 918 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 PADI3Q9ULW8 664 aa16.06■□□□□ 0.16
CCHCR1-202ENST00000396263 A0A0U1RQF3 1178 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 RPLP2P05387 115 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 NDST2P52849 883 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 STX5Q13190 355 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 MTA1Q13330 715 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 PIK3R6Q5UE93 754 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 SLC22A9Q8IVM8 553 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 HMGCLL1Q8TB92 370 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 KLHL32Q96NJ5 620 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 EPB41L1Q9H4G0 881 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 CYP4F12Q9HCS2 524 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 MRPL40Q9NQ50 206 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 SUCOQ9UBS9 1254 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 PCDHGA7Q9Y5G6 932 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 MRPL42Q9Y6G3 142 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 A0A1W2PQH9 124 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 WISP3O95389 354 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 ASGR1P07306 291 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 CCDC166P0CW27 439 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 CD52P31358 61 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 C1QTNF8P60827 252 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 PSME3P61289 254 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 DSC3Q14574 896 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 HECTD2Q5U5R9 776 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 CILP2Q8IUL8 1156 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 TOP1MTQ969P6 601 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 SLC39A13Q96H72 371 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 PKP2Q99959 881 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 TNFRSF12AQ9NP84 129 aa16.05■□□□□ 0.16
CCHCR1-202ENST00000396263 NUDT5Q9UKK9 219 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms