RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 NLRP14Q86W24 1093 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 FAM131BQ86XD5 332 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 PCDH20Q8N6Y1 951 aaKnown RBP6.25□□□□□ -1.41
PTPN20-208ENST00000395727 NEK11Q8NG66 645 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 OR2A12Q8NGT7 310 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 OR6P1Q8NGX9 317 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 PIP4K2CQ8TBX8 421 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 SLC20A1Q8WUM9 679 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 CPA5Q8WXQ8 436 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 ERLEC1Q96DZ1 483 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 LRIG1Q96JA1 1093 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 CFAP57Q96MR6 1250 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 EIF3CQ99613 913 aaKnown RBP6.25□□□□□ -1.41
PTPN20-208ENST00000395727 SCNM1Q9BWG6 230 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 HDAC8Q9BY41 377 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 ACE2Q9BYF1 805 aaPredicted RBP6.25□□□□□ -1.41
PTPN20-208ENST00000395727 EDEM3Q9BZQ6 932 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 NAT10Q9H0A0 1025 aaKnown RBP6.25□□□□□ -1.41
PTPN20-208ENST00000395727 SIK2Q9H0K1 926 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 EBF2Q9HAK2 575 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 NLRC4Q9NPP4 1024 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 TMEM248Q9NWD8 314 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 COX16Q9P0S2 106 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 ARHGAP20Q9P2F6 1191 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 SARDHQ9UL12 918 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 APOBEC2Q9Y235 224 aaKnown RBP6.25□□□□□ -1.41
PTPN20-208ENST00000395727 SLCO1B1Q9Y6L6 691 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 ACACBO00763 2458 aa6.25□□□□□ -1.41
PTPN20-208ENST00000395727 EPG5Q9HCE0 2579 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 TP53BP1Q12888 1972 aaPredicted RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 USP24Q9UPU5 2620 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 ASCC3Q8N3C0 2202 aaKnown RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SPAARA0A1B0GVQ0 90 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 ZSCAN5CA6NGD5 496 aaPredicted RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 WASH4PA8MWX3 477 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 GOLGA8SH3BPF8 625 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 AP1G1O43747 822 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 WNT11O96014 354 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CAPNS1P04632 268 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CTSLP07711 333 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 FTH1P19P0C7X4 201 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CDK4P11802 303 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 KRT3P12035 628 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 VAV1P15498 845 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 FERP16591 822 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 L1CAMP32004 1257 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 PRKCIP41743 596 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 RXRGP48443 463 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CSNK1EP49674 416 aaKnown RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 KLK7P49862 253 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 ZNF143P52747 638 aaPredicted RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 HDAC4P56524 1084 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 NXPH1P58417 271 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 YBEYP58557 167 aaPredicted RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 TAS2R38P59533 333 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 RNASE9P60153 205 aaKnown RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 FAM193AP78312 1265 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 GNA12Q03113 381 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 UBXN1Q04323 297 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CNTN1Q12860 1018 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CCDC14Q49A88 953 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SETMARQ53H47 684 aaPredicted RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 C2CD6Q53TS8 623 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 FIGNQ5HY92 759 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 PIP5KL1Q5T9C9 394 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SFMBT2Q5VUG0 894 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 WDR59Q6PJI9 974 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 IRF2BP2Q7Z5L9 587 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 PRPF39Q86UA1 669 aaKnown RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 EMC1Q8N766 993 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 C19orf47Q8N9M1 422 aaKnown RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 ATP11CQ8NB49 1132 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 TMEM145Q8NBT3 493 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 OR2I1PQ8NGU4 316 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 OR14C36Q8NHC7 312 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 RXFP2Q8WXD0 754 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 CASKIN2Q8WXE0 1202 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SNX19Q92543 992 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 PPP1R16AQ96I34 528 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 HRASLS5Q96KN8 279 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SLC6A18Q96N87 628 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 PCDHB18PQ96TA0 734 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 ELF4Q99607 663 aaPredicted RBP6.24□□□□□ -1.41
PTPN20-208ENST00000395727 C11orf70Q9BRQ4 267 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 TTYH3Q9C0H2 523 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 MAGEH1Q9H213 219 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 IL21RQ9HBE5 538 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SEMA3GQ9NS98 782 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 DONSONQ9NYP3 566 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 ADAM22Q9P0K1 906 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 DKK4Q9UBT3 224 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 OR12D3Q9UGF7 316 aa6.24□□□□□ -1.41
PTPN20-208ENST00000395727 SDK1Q7Z5N4 2213 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
PTPN20-208ENST00000395727 CEP295Q9C0D2 2601 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 A0A0D9SEW6 157 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 ANKRD62A6NC57 917 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 SMTNL1A8MU46 457 aa6.23□□□□□ -1.41
PTPN20-208ENST00000395727 PRAMEF26H0Y7S4 382 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms