RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TSPYL2Q9H2G4 693 aaPredicted RBP18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 ATXN3LQ9H3M9 355 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 MAFKO60675 156 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 HLA-DQB2P05538 268 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 LHX1P48742 406 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 USP46P62068 366 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 SEPT6Q14141 434 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 ADRM1Q16186 407 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 MTX3Q5HYI7 312 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 KDELC2Q7Z4H8 507 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 CARM1Q86X55 608 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 ALDH16A1Q8IZ83 802 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 DQX1Q8TE96 717 aaKnown RBP18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC29A1Q99808 456 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC39A8Q9C0K1 460 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 ARHGEF38Q9NXL2 777 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.45■□□□□ 0.54
PCDHA1-202ENST00000394633 ARHGEF37A1IGU5 675 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 KPNA6O60684 536 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 IPO13O94829 963 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 SNRPB2P08579 225 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 PAMP19021 973 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC7A1P30825 629 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 PLK1P53350 603 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 C6orf10Q5SRN2 563 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 TWF2Q6IBS0 349 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 NEPROQ6NW34 567 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 CYP2R1Q6VVX0 501 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 TSPAN14Q8NG11 270 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 DUS3LQ96G46 650 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 SMARCD1Q96GM5 515 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 MRGPRX2Q96LB1 330 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 ZNF512Q96ME7 567 aaPredicted RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 UHRF1Q96T88 793 aaPredicted RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 OSBPL11Q9BXB4 747 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 SPAG4Q9NPE6 437 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 ENTPD7Q9NQZ7 604 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 SAGE1Q9NXZ1 904 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 SNX13Q9Y5W8 968 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 MRPL42Q9Y6G3 142 aaKnown RBP18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 FRMPD3Q5JV73 1810 aa18.44■□□□□ 0.54
PCDHA1-202ENST00000394633 MRASO14807 208 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 MATN3O15232 486 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 HNRNPRO43390 633 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 CDH2P19022 906 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 FAM83EQ2M2I3 478 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 NOMO2Q5JPE7 1267 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 C8orf82Q6P1X6 216 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 LAYNQ6UX15 382 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 NUP93Q8N1F7 819 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 AFAP1L2Q8N4X5 818 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 EML4Q9HC35 981 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 MRGBPQ9NV56 204 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 TMEM181Q9P2C4 612 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 CNOT6Q9ULM6 557 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 LAMA2P24043 3122 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 MYCP01106 439 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 GNRH1P01148 92 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 NELFEP18615 380 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 CST5P28325 142 aaPredicted RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 GRK4P32298 578 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 HPCAP84074 193 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 RANBP10Q6VN20 620 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 MYO1HQ8N1T3 1032 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 TMEM86AQ8N2M4 240 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 C3orf58Q8NDZ4 430 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 OR9I1Q8NGQ6 314 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 CCDC126Q96EE4 140 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 CIB1Q99828 191 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 CCT7Q99832 543 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 FSD1LQ9BXM9 530 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 NDFIP2Q9NV92 336 aa18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 GMPR2Q9P2T1 348 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 IPO11Q9UI26 975 aaKnown RBP18.43■□□□□ 0.54
PCDHA1-202ENST00000394633 GPC4O75487 556 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 SRP72O76094 671 aaKnown RBP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 LTA4HP09960 611 aaKnown RBP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CDK4P11802 303 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 ZNF23P17027 643 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 RANBP1P43487 201 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 AFF1P51825 1210 aaKnown RBP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 ARTNQ5T4W7 220 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 AGAP9Q5VTM2 703 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 LHX8Q68G74 356 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CYHR1Q6ZMK1 362 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 PNPLA1Q8N8W4 532 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 GRIN3AQ8TCU5 1115 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 IRGQQ8WZA9 623 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 PHF21BQ96EK2 531 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 TMEM79Q9BSE2 394 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 HAUS8Q9BT25 410 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 GSTO2Q9H4Y5 243 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CSNK1G1Q9HCP0 422 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 RBM22Q9NW64 420 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CROTQ9UKG9 612 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CDH9Q9ULB4 789 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 UBFD1O14562 309 aaKnown RBP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 NRP2O60462 931 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 H6PDO95479 791 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms