RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 KCNH1O95259 989 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 APOA4P06727 396 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 NR4A1P22736 598 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 IL4RP24394 825 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 ADORA2AP29274 412 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 DLG2Q15700 870 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 CYBRD1Q53TN4 286 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 ANGPTL6Q8NI99 470 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 PGBD4Q96DM1 585 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 KIF12Q96FN5 646 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 FBXL20Q96IG2 436 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 PIWIL1Q96J94 861 aaKnown RBP18.96■□□□□ 0.63
HOXC6-202ENST00000394331 TRIM15Q9C019 465 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 SMPD3Q9NY59 655 aaPredicted RBP18.96■□□□□ 0.63
HOXC6-202ENST00000394331 MTRRQ9UBK8 725 aa18.96■□□□□ 0.63
HOXC6-202ENST00000394331 VTNP04004 478 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 SLC12A1Q13621 1099 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 SELPLGQ14242 412 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 ARMCX2Q7L311 632 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 LEMD2Q8NC56 503 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 SHCBP1Q8NEM2 672 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 CYGBQ8WWM9 190 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 VWA7Q9Y334 891 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 ASNA1O43681 348 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 IDH3BO43837 385 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 UGT2B11O75310 529 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 ALX3O95076 343 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 TFEBP19484 476 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 SLC6A3Q01959 620 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 RAB6CQ53S08 254 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 PPM1JQ5JR12 505 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 WDR45BQ5MNZ6 344 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 GRTP1Q5TC63 336 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 KCNT2Q6UVM3 1135 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 CANT1Q8WVQ1 401 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 RASSF5Q8WWW0 418 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 ZNF670Q9BS34 389 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 LHPPQ9H008 270 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 RAB6CQ9H0N0 254 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 SNX15Q9NRS6 342 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 GMIPQ9P107 970 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 ANGPTL3Q9Y5C1 460 aa18.95■□□□□ 0.62
HOXC6-202ENST00000394331 ZNF487B1APH4 448 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 MDM4O15151 490 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 TSPAN1O60635 241 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 BCAS1O75363 584 aaPredicted RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 MPOP05164 745 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 FCGR1AP12314 374 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 GP5P40197 560 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 RGS7P49802 495 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 ADARB1P78563 741 aaKnown RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 DNASE1L3Q13609 305 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PELI3Q8N2H9 469 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PQLC3Q8N755 202 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 C12orf29Q8N999 325 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 CNGB3Q9NQW8 809 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 KLQ9UEF7 1012 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 TMA7Q9Y2S6 64 aaKnown RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 TOMM70O94826 608 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 KRT6AP02538 564 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 KRT6BP04259 564 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 FASP25445 335 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 RBL1P28749 1068 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PHC1P78364 1004 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 ILF2Q12905 390 aaKnown RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 TMEM198Q66K66 360 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PMF1Q6P1K2 205 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 LINC00523Q86TU6 105 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 ZDHHC17Q8IUH5 632 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 KIAA2013Q8IYS2 634 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 ADAM32Q8TC27 787 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 NAT9Q9BTE0 207 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 DNAI2Q9GZS0 605 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 POLR2AP24928 1970 aaKnown RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 A8MU76 341 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PLA2G16P53816 162 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 AQP6Q13520 282 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 INPP5AQ14642 412 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 KIZQ2M2Z5 673 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PKDCCQ504Y2 493 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PPP1R26Q5T8A7 1209 aaPredicted RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 SLC16A12Q6ZSM3 486 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PCDH20Q8N6Y1 951 aaKnown RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 BPIFB6Q8NFQ5 453 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PPTC7Q8NI37 304 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 PCDH19Q8TAB3 1148 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 SUN5Q8TC36 379 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 CPNE1Q99829 537 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 SNRNP25Q9BV90 132 aaKnown RBP18.94■□□□□ 0.62
HOXC6-202ENST00000394331 NEK6Q9HC98 313 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 TBC1D14Q9P2M4 693 aa18.94■□□□□ 0.62
HOXC6-202ENST00000394331 RNF103-CHMP3A0A140T963 221 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 KCNU1A8MYU2 1149 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 PTPN9P43378 593 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 STX1BP61266 288 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 SEMA5AQ13591 1074 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 TBCELQ5QJ74 424 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 REP15Q6BDI9 236 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 CYP2R1Q6VVX0 501 aa18.93■□□□□ 0.62
HOXC6-202ENST00000394331 TAS2R42Q7RTR8 314 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms