RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 MFSD10Q14728 455 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 ZNF470Q6ECI4 717 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 ASB15Q8WXK1 588 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 CREB3L1Q96BA8 519 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 GPATCH1Q9BRR8 931 aaKnown RBP13.46□□□□□ -0.26
USP49-203ENST00000394253 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 ZNF700Q9H0M5 742 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 NELFAQ9H3P2 528 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 MDFIC2A0A1B0GVS7 189 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 CCNDBP1O95273 360 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.26
USP49-203ENST00000394253 CBLBQ13191 982 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 COL26A1Q96A83 441 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 RNF146Q9NTX7 359 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 CYP4F8P98187 520 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 PFKFB4Q16877 469 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 NT5DC3Q86UY8 548 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 P2RY8Q86VZ1 359 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 DYNLL2Q96FJ2 89 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 RNF38Q9H0F5 515 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 DNAJC10Q8IXB1 793 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 SELENOMQ8WWX9 145 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 TM9SF3Q9HD45 589 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 NUP205Q92621 2012 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 SULT1B1O43704 296 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 LINGO3P0C6S8 592 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 CYP11B1P15538 503 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MAB21L1Q13394 359 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 FAM91A1Q658Y4 838 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MRPL57Q9BQC6 102 aaKnown RBP13.45□□□□□ -0.26
USP49-203ENST00000394253 BBIP1A8MTZ0 92 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.26
USP49-203ENST00000394253 KDM6AO15550 1401 aaPredicted RBP13.45□□□□□ -0.26
USP49-203ENST00000394253 ANXA8L1Q5VT79 327 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 COMTD1Q86VU5 262 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 STRBPQ96SI9 672 aaKnown RBP13.45□□□□□ -0.26
USP49-203ENST00000394253 CBWD1Q9BRT8 395 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MAB21L2Q9Y586 359 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 SVILO95425 2214 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 FMO4P31512 558 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MATKP42679 507 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
USP49-203ENST00000394253 EPHA7Q15375 998 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 BEND5Q7L4P6 421 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 KAT2AQ92830 837 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 IL1RAPQ9NPH3 570 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 RABL2AQ9UBK7 228 aaPredicted RBP13.45□□□□□ -0.26
USP49-203ENST00000394253 GULP1Q9UBP9 304 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 IFNA10P01566 189 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MTHFRP42898 656 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 TAF6P49848 677 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
USP49-203ENST00000394253 CREB5Q02930 508 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 CA9Q16790 459 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 PLAGL2Q9UPG8 496 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 UMODL1Q5DID0 1318 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 AIREO43918 545 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 GSTT2P0CG29 244 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 RPA1P27694 616 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MAPK9P45984 424 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 TPTEP56180 551 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 OR2B6P58173 313 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 RAD51AP1Q96B01 352 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 MARK4Q96L34 752 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 UNKLQ9H9P5 680 aaKnown RBP13.45□□□□□ -0.26
USP49-203ENST00000394253 CFL2Q9Y281 166 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 FKBP7Q9Y680 259 aa13.45□□□□□ -0.26
USP49-203ENST00000394253 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 MPDZO75970 2070 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PER2O15055 1255 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 RPLP2P05387 115 aaKnown RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 KLRC1P26715 233 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ACSL1P33121 698 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CRY2Q49AN0 593 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CCDC24Q8N4L8 307 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 IPCEF1Q8WWN9 437 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 ITFG2Q969R8 447 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TRPV4Q9HBA0 871 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PRAMEF1O95521 474 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 EPCAMP16422 314 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 OR3A3P47888 321 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 OR3A2P47893 321 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ITGA7Q13683 1181 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 CD302Q8IX05 232 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 FAM13CQ8NE31 585 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 TBC1D10AQ9BXI6 508 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 PHF24Q9UPV7 400 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ABCA8O94911 1581 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 ZNF135P52742 658 aaPredicted RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 PEX6Q13608 980 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 CRY1Q16526 586 aa13.44□□□□□ -0.26
USP49-203ENST00000394253 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
USP49-203ENST00000394253 FAAH2Q6GMR7 532 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms