RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CDR2Q01850 454 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 SRSF1Q07955 248 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHMP3-202ENST00000393773 RALGDSQ12967 914 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 CYTH1Q15438 398 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 TBR1Q16650 682 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 PARP15Q460N3 678 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 C14orf28Q4W4Y0 310 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 OGFOD3Q6PK18 319 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 ATG14Q6ZNE5 492 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 Q8N9G6 341 aaPredicted RBP15.47■□□□□ 0.07
CHMP3-202ENST00000393773 MLKLQ8NB16 471 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 SLC30A5Q8TAD4 765 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 FUBP1Q96AE4 644 aaKnown RBP15.47■□□□□ 0.07
CHMP3-202ENST00000393773 SEMA3CQ99985 751 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 SEPT10Q9P0V9 454 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 ATP8A1Q9Y2Q0 1164 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 DAAM1Q9Y4D1 1078 aa15.47■□□□□ 0.07
CHMP3-202ENST00000393773 A0A1W2PQC6 194 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 WASH4PA8MWX3 477 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 B4DGG1 531 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.46■□□□□ 0.07
CHMP3-202ENST00000393773 AGRPO00253 132 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 BUB1BO60566 1050 aaPredicted RBP15.46■□□□□ 0.07
CHMP3-202ENST00000393773 TNFP01375 233 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 GM2AP17900 193 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 YBEYP58557 167 aaPredicted RBP15.46■□□□□ 0.07
CHMP3-202ENST00000393773 CYP4F2P78329 520 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 C16orf72Q14CZ0 275 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 TPD52L1Q16890 204 aaPredicted RBP15.46■□□□□ 0.07
CHMP3-202ENST00000393773 ERAP2Q6P179 960 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 BRAT1Q6PJG6 821 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 UMODL1-AS1Q8N2C9 162 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 OR56A4Q8NGH8 313 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 USP7Q93009 1102 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 SEMA6CQ9H3T2 930 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 SUV39H2Q9H5I1 410 aa15.46■□□□□ 0.07
CHMP3-202ENST00000393773 MRPL40Q9NQ50 206 aaKnown RBP15.46■□□□□ 0.07
CHMP3-202ENST00000393773 UTP20O75691 2785 aaKnown RBP15.45■□□□□ 0.06
CHMP3-202ENST00000393773 CCP110O43303 1012 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 NUDT21O43809 227 aaKnown RBP15.45■□□□□ 0.06
CHMP3-202ENST00000393773 GFPT2O94808 682 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 UNGP13051 313 aaPredicted RBP15.45■□□□□ 0.06
CHMP3-202ENST00000393773 GPD1P21695 349 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 CD82P27701 267 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 RFC1P35251 1148 aaPredicted RBP15.45■□□□□ 0.06
CHMP3-202ENST00000393773 RGRP47804 291 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 MAPK10P53779 464 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 GRM3Q14832 879 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 CLCA4Q14CN2 919 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 DPCR1Q3MIW9 517 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 SPECC1LQ69YQ0 1117 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 SLFN11Q7Z7L1 901 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 CCL4L1Q8NHW4 92 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 ZNF641Q96N77 438 aaPredicted RBP15.45■□□□□ 0.06
CHMP3-202ENST00000393773 TUBGCP5Q96RT8 1024 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 CMKLR1Q99788 373 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 B3GNT4Q9C0J1 378 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 TMEM168Q9H0V1 697 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 LRRC19Q9H756 370 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 LRIT1Q9P2V4 623 aa15.45■□□□□ 0.06
CHMP3-202ENST00000393773 UBA2Q9UBT2 640 aaPredicted RBP15.45■□□□□ 0.06
CHMP3-202ENST00000393773 CACNB4O00305 520 aaPredicted RBP15.44■□□□□ 0.06
CHMP3-202ENST00000393773 PPFIA2O75334 1257 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 RECQL5O94762 991 aaPredicted RBP15.44■□□□□ 0.06
CHMP3-202ENST00000393773 SFTPCP11686 197 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 KRT3P12035 628 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 ARSDP51689 593 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 JAM2P57087 298 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 B4GALNT1Q00973 533 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 NR1D2Q14995 579 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 MAP9Q49MG5 647 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 EFHC2Q5JST6 749 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 PHF19Q5T6S3 580 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 ZNF438Q7Z4V0 828 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 TAF8Q7Z7C8 310 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 CAMK1DQ8IU85 385 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 PELI3Q8N2H9 469 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 C3orf20Q8ND61 904 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 FAM46DQ8NEK8 389 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 PMEPA1Q969W9 287 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 FZD10Q9ULW2 581 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 NBASA2RRP1 2371 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 TEX15Q9BXT5 2789 aa15.44■□□□□ 0.06
CHMP3-202ENST00000393773 ZNF106Q9H2Y7 1883 aaKnown RBP15.44■□□□□ 0.06
CHMP3-202ENST00000393773 NBPF19A0A087WUL8 3843 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 TCRBV5S1A1TA0A578 114 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 CFAP69A5D8W1 941 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 J3KR12 359 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 TNFRSF10CO14798 259 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 EPHB6O15197 1021 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 FGF10O15520 208 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-202ENST00000393773 CREB3O43889 395 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 PRAMEF11O60813 436 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 HOXC4P09017 264 aaPredicted RBP15.43■□□□□ 0.06
CHMP3-202ENST00000393773 TRIM23P36406 574 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 KLK7P49862 253 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 BECN1Q14457 450 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 COLEC12Q5KU26 742 aa15.43■□□□□ 0.06
CHMP3-202ENST00000393773 CFAP58Q5T655 872 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms