RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 DGKGP49619 791 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 IRX4P78413 519 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SF3A3Q12874 501 aaKnown RBP eCLIP8.68□□□□□ -1.02
TDP1-203ENST00000393454 PDE1CQ14123 709 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 USP10Q14694 798 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 PTPRRQ15256 657 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 TAF1AQ15573 450 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 DLG2Q15700 870 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 MYLK3Q32MK0 819 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ATAT1Q5SQI0 421 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 C22orf39Q6P5X5 142 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 SYCE2Q6PIF2 218 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CDHR3Q6ZTQ4 885 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ADIPOR2Q86V24 386 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ZC3HC1Q86WB0 502 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 GPATCH11Q8N954 259 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CCDC63Q8NA47 563 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 C2CD4AQ8NCU7 369 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 MDGA1Q8NFP4 955 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 OR2AP1Q8NGE2 309 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CYB5D2Q8WUJ1 264 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 MYLIPQ8WY64 445 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 ZNF317Q96PQ6 595 aaPredicted RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 CIPCQ9C0C6 399 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 MFSD1Q9H3U5 465 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 RHOJQ9H4E5 214 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 GRID1Q9ULK0 1009 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 HS3ST2Q9Y278 367 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 FNDC3AQ9Y2H6 1198 aaKnown RBP8.68□□□□□ -1.02
TDP1-203ENST00000393454 PLLPQ9Y342 182 aa8.68□□□□□ -1.02
TDP1-203ENST00000393454 CDH23Q9H251 3354 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 CCDC162PA2VCL2 907 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 STX7O15400 261 aaKnown RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 CD3EAPO15446 510 aaKnown RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 SIN3BO75182 1162 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ZNF821O75541 412 aaPredicted RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 HAUS5O94927 633 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 PGLSO95336 258 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 NFATC1O95644 943 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 TOP3BO95985 862 aaKnown RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 GOT2P00505 430 aaKnown RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 MPOP05164 745 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ATXN8OSP0DMR3 200 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 DRD4P21917 467 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 LPOP22079 712 aaPredicted RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 GABRB3P28472 473 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 SERPINA4P29622 427 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 BMP8BP34820 402 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 NNMTP40261 264 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 HADHAP40939 763 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 RECQLP46063 649 aaPredicted RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 RAD51Q06609 339 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ZKSCAN8Q15776 578 aaPredicted RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 ZSCAN26Q16670 478 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 GEN1Q17RS7 908 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 CARD16Q5EG05 197 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 TANGO2Q6ICL3 276 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 CES5AQ6NT32 575 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 TMEM184AQ6ZMB5 413 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 LDB1Q86U70 411 aaPredicted RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 SLC41A1Q8IVJ1 513 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 TNS4Q8IZW8 715 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 PNPLA1Q8N8W4 532 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ACVR1CQ8NER5 493 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 OR4K2Q8NGD2 314 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 SORCS1Q8WY21 1168 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 SPOCK2Q92563 424 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 PEX13Q92968 403 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 CDKN2AIPNLQ96HQ2 116 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ELMO2Q96JJ3 720 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 GPR63Q9BZJ6 419 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ZDHHC6Q9H6R6 413 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ZFP14Q9HCL3 533 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 NLE1Q9NVX2 485 aaPredicted RBP8.67□□□□□ -1.02
TDP1-203ENST00000393454 DCDC2Q9UHG0 476 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 TLK1Q9UKI8 766 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 ERVW-1Q9UQF0 538 aa8.67□□□□□ -1.02
TDP1-203ENST00000393454 A0A096LPK6 155 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 A0A0U1RQS6 177 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 FAM95CA0A1B0GW59 222 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GLRA3O75311 464 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GSRP00390 522 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ALPIP09923 528 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 HOXB8P17481 243 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 TAC1P20366 129 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 PMLP29590 882 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GMPRP36959 345 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 GRIA4P48058 902 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 ZNF140P52738 457 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 SLC12A2P55011 1212 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 PDK4Q16654 411 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 FASTKD1Q53R41 847 aaKnown RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 N4BP2L1Q5TBK1 243 aaPredicted RBP8.66□□□□□ -1.02
TDP1-203ENST00000393454 TMEM215Q68D42 235 aa8.66□□□□□ -1.02
TDP1-203ENST00000393454 MRNIPQ6NTE8 343 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms