RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ARRB2P32121 409 aa15.04■□□□□ -0
MKS1-202ENST00000393119 VIPR2P41587 438 aa15.04■□□□□ -0
MKS1-202ENST00000393119 NRIP1P48552 1158 aa15.04■□□□□ -0
MKS1-202ENST00000393119 DLG1Q12959 904 aa15.04■□□□□ -0
MKS1-202ENST00000393119 PRSS36Q5K4E3 855 aa15.04■□□□□ -0
MKS1-202ENST00000393119 ALG1LQ6GMV1 187 aa15.04■□□□□ -0
MKS1-202ENST00000393119 RAPH1Q70E73 1250 aa15.04■□□□□ -0
MKS1-202ENST00000393119 ARID3BQ8IVW6 561 aaPredicted RBP15.04■□□□□ -0
MKS1-202ENST00000393119 FEM1CQ96JP0 617 aa15.04■□□□□ -0
MKS1-202ENST00000393119 IGFLR1Q9H665 355 aa15.04■□□□□ -0
MKS1-202ENST00000393119 BATF3Q9NR55 127 aa15.04■□□□□ -0
MKS1-202ENST00000393119 MARCOQ9UEW3 520 aaPredicted RBP15.04■□□□□ -0
MKS1-202ENST00000393119 ARHGAP26Q9UNA1 814 aa15.04■□□□□ -0
MKS1-202ENST00000393119 USP15Q9Y4E8 981 aaPredicted RBP15.04■□□□□ -0
MKS1-202ENST00000393119 PCDHB9Q9Y5E1 797 aa15.04■□□□□ -0
MKS1-202ENST00000393119 MYO9BQ13459 2157 aa15.04■□□□□ -0
MKS1-202ENST00000393119 CCDC162PA2VCL2 907 aa15.04■□□□□ -0
MKS1-202ENST00000393119 CARNS1A5YM72 827 aa15.04■□□□□ -0
MKS1-202ENST00000393119 ITM2AO43736 263 aa15.04■□□□□ -0
MKS1-202ENST00000393119 GOT2P00505 430 aaKnown RBP15.04■□□□□ -0
MKS1-202ENST00000393119 KITP10721 976 aa15.04■□□□□ -0
MKS1-202ENST00000393119 IRX1P78414 480 aaPredicted RBP15.04■□□□□ -0
MKS1-202ENST00000393119 MESP2Q0VG99 397 aa15.04■□□□□ -0
MKS1-202ENST00000393119 BST1Q10588 318 aa15.04■□□□□ -0
MKS1-202ENST00000393119 C10orf107Q8IVU9 208 aa15.04■□□□□ -0
MKS1-202ENST00000393119 KCTD4Q8WVF5 259 aa15.04■□□□□ -0
MKS1-202ENST00000393119 ZFYVE19Q96K21 471 aa15.04■□□□□ -0
MKS1-202ENST00000393119 OLFM1Q99784 485 aa15.04■□□□□ -0
MKS1-202ENST00000393119 MIA3Q5JRA6 1907 aa15.03■□□□□ -0
MKS1-202ENST00000393119 FAM95CA0A1B0GW59 222 aa15.03■□□□□ -0
MKS1-202ENST00000393119 TYW5A2RUC4 315 aaKnown RBP15.03■□□□□ -0
MKS1-202ENST00000393119 ANTXRLA6NF34 631 aa15.03■□□□□ -0
MKS1-202ENST00000393119 PLIN3O60664 434 aa15.03■□□□□ -0
MKS1-202ENST00000393119 NDST3O95803 873 aa15.03■□□□□ -0
MKS1-202ENST00000393119 CNTFP26441 200 aa15.03■□□□□ -0
MKS1-202ENST00000393119 ALDH3A1P30838 453 aa15.03■□□□□ -0
MKS1-202ENST00000393119 EPHA5P54756 1037 aa15.03■□□□□ -0
MKS1-202ENST00000393119 TAS2R39P59534 338 aa15.03■□□□□ -0
MKS1-202ENST00000393119 FUT11Q495W5 492 aa15.03■□□□□ -0
MKS1-202ENST00000393119 KIAA0930Q6ICG6 404 aaPredicted RBP15.03■□□□□ -0
MKS1-202ENST00000393119 NCEH1Q6PIU2 408 aa15.03■□□□□ -0
MKS1-202ENST00000393119 NUDCD3Q8IVD9 361 aa15.03■□□□□ -0
MKS1-202ENST00000393119 C2CD4AQ8NCU7 369 aaPredicted RBP15.03■□□□□ -0
MKS1-202ENST00000393119 EID2BQ96D98 161 aa15.03■□□□□ -0
MKS1-202ENST00000393119 ELMO2Q96JJ3 720 aa15.03■□□□□ -0
MKS1-202ENST00000393119 PBX4Q9BYU1 374 aa15.03■□□□□ -0
MKS1-202ENST00000393119 MTG2Q9H4K7 406 aa15.03■□□□□ -0
MKS1-202ENST00000393119 TASP1Q9H6P5 420 aa15.03■□□□□ -0
MKS1-202ENST00000393119 SLCO3A1Q9UIG8 710 aa15.03■□□□□ -0
MKS1-202ENST00000393119 AP3B1O00203 1094 aa15.03■□□□□ -0
MKS1-202ENST00000393119 SLC35E2BP0CK96 405 aa15.03■□□□□ -0
MKS1-202ENST00000393119 MAGEA12P43365 314 aa15.03■□□□□ -0
MKS1-202ENST00000393119 CCR10P46092 362 aa15.03■□□□□ -0
MKS1-202ENST00000393119 NAB1Q13506 487 aa15.03■□□□□ -0
MKS1-202ENST00000393119 FRG1Q14331 258 aaKnown RBP15.03■□□□□ -0
MKS1-202ENST00000393119 PLEKHG6Q3KR16 790 aa15.03■□□□□ -0
MKS1-202ENST00000393119 MPPE1Q53F39 396 aa15.03■□□□□ -0
MKS1-202ENST00000393119 FASTKD1Q53R41 847 aaKnown RBP15.03■□□□□ -0
MKS1-202ENST00000393119 TCEAL5Q5H9L2 206 aa15.03■□□□□ -0
MKS1-202ENST00000393119 LRRC73Q5JTD7 316 aa15.03■□□□□ -0
MKS1-202ENST00000393119 LY6G5CQ5SRR4 150 aa15.03■□□□□ -0
MKS1-202ENST00000393119 PIM3Q86V86 326 aa15.03■□□□□ -0
MKS1-202ENST00000393119 CNTN4Q8IWV2 1026 aa15.03■□□□□ -0
MKS1-202ENST00000393119 BBS5Q8N3I7 341 aa15.03■□□□□ -0
MKS1-202ENST00000393119 OR4K2Q8NGD2 314 aa15.03■□□□□ -0
MKS1-202ENST00000393119 ERLEC1Q96DZ1 483 aa15.03■□□□□ -0
MKS1-202ENST00000393119 NUDCD1Q96RS6 583 aa15.03■□□□□ -0
MKS1-202ENST00000393119 GPR22Q99680 433 aa15.03■□□□□ -0
MKS1-202ENST00000393119 OMDQ99983 421 aa15.03■□□□□ -0
MKS1-202ENST00000393119 NSRP1Q9H0G5 558 aaKnown RBP15.03■□□□□ -0
MKS1-202ENST00000393119 NKX2-4Q9H2Z4 354 aa15.03■□□□□ -0
MKS1-202ENST00000393119 RHOJQ9H4E5 214 aa15.03■□□□□ -0
MKS1-202ENST00000393119 STK39Q9UEW8 545 aa15.03■□□□□ -0
MKS1-202ENST00000393119 C15orf41Q9Y2V0 281 aa15.03■□□□□ -0
MKS1-202ENST00000393119 CFAP73A6NFT4 308 aa15.02■□□□□ -0
MKS1-202ENST00000393119 TK2O00142 265 aa15.02■□□□□ -0
MKS1-202ENST00000393119 LATS1O95835 1130 aa15.02■□□□□ -0
MKS1-202ENST00000393119 PROCP04070 461 aa15.02■□□□□ -0
MKS1-202ENST00000393119 BPGMP07738 259 aa15.02■□□□□ -0
MKS1-202ENST00000393119 CA5AP35218 305 aa15.02■□□□□ -0
MKS1-202ENST00000393119 SERPINB8P50452 374 aa15.02■□□□□ -0
MKS1-202ENST00000393119 PRAMEP78395 509 aa15.02■□□□□ -0
MKS1-202ENST00000393119 PCLAFQ15004 111 aa15.02■□□□□ -0
MKS1-202ENST00000393119 TMEM215Q68D42 235 aa15.02■□□□□ -0
MKS1-202ENST00000393119 ZSWIM9Q86XI8 627 aa15.02■□□□□ -0
MKS1-202ENST00000393119 VOPP1Q96AW1 172 aa15.02■□□□□ -0
MKS1-202ENST00000393119 CCDC97Q96F63 343 aaPredicted RBP15.02■□□□□ -0
MKS1-202ENST00000393119 LMLNQ96KR4 655 aa15.02■□□□□ -0
MKS1-202ENST00000393119 TSSK1BQ9BXA7 367 aa15.02■□□□□ -0
MKS1-202ENST00000393119 BBS2Q9BXC9 721 aa15.02■□□□□ -0
MKS1-202ENST00000393119 MRM3Q9HC36 420 aaKnown RBP15.02■□□□□ -0
MKS1-202ENST00000393119 DENND4CQ5VZ89 1909 aa15.02□□□□□ -0.01
MKS1-202ENST00000393119 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.02□□□□□ -0.01
MKS1-202ENST00000393119 FGF1P05230 155 aa15.02□□□□□ -0.01
MKS1-202ENST00000393119 SBK3P0C264 359 aa15.02□□□□□ -0.01
MKS1-202ENST00000393119 HLA-DPA1P20036 260 aa15.02□□□□□ -0.01
MKS1-202ENST00000393119 RGS9BPQ6ZS82 235 aa15.02□□□□□ -0.01
MKS1-202ENST00000393119 CILP2Q8IUL8 1156 aa15.02□□□□□ -0.01
MKS1-202ENST00000393119 RYBPQ8N488 228 aaPredicted RBP15.02□□□□□ -0.01
MKS1-202ENST00000393119 FITM2Q8N6M3 262 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms