RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TRNAU1APQ9NX07 287 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 TRMT6Q9UJA5 497 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 GNEQ9Y223 722 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 VWA7Q9Y334 891 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 MBLAC1A4D2B0 266 aaPredicted RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 BAIAP3O94812 1187 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 RPL5P46777 297 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 HPCAP84074 193 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 GALNT2Q10471 571 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 DPYSQ14117 519 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 GPR158Q5T848 1215 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 PTRHD1Q6GMV3 140 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 GK5Q6ZS86 529 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 LINC01465Q8N7H1 131 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 PTGR2Q8N8N7 351 aaPredicted RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 MZB1Q8WU39 189 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 STN1Q9H668 368 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 SEMA4BQ9NPR2 832 aaPredicted RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 DDX28Q9NUL7 540 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 PPM1HQ9ULR3 514 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 TRIM17Q9Y577 477 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 GNGT2O14610 69 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 GSTA4O15217 222 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 PRKCGP05129 697 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 MAP4P27816 1152 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 PRKCZQ05513 592 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 SLC10A7Q0GE19 358 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 LPIN1Q14693 890 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 CLEC6AQ6EIG7 209 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 FRMD7Q6ZUT3 714 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 ARNTL2Q8WYA1 636 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 PBXIP1Q96AQ6 731 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 PTCD3Q96EY7 689 aaKnown RBP10.59□□□□□ -0.71
CALD1-203ENST00000393118 SLC2A13Q96QE2 648 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 SLC45A1Q9Y2W3 748 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 NUP205Q92621 2012 aa10.59□□□□□ -0.71
CALD1-203ENST00000393118 J3KR12 359 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 PSMD12O00232 456 aaPredicted RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 MRASO14807 208 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 PQBP1O60828 265 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 NELFEP18615 380 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 CLCN2P51788 898 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 NRF1Q16656 503 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 TIFABQ6ZNK6 161 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 PAQR9Q6ZVX9 377 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 GLT6D1Q7Z4J2 308 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 C14orf80Q86SX3 495 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 ZC3HC1Q86WB0 502 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 HEATR4Q86WZ0 1026 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 OR10T2Q8NGX3 314 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 IRGQQ8WZA9 623 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 KCNN1Q92952 543 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 PANX3Q96QZ0 392 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 CASS4Q9NQ75 786 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 VPS28Q9UK41 221 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 KCNU1A8MYU2 1149 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 ZNF487B1APH4 448 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 ITGB1P05556 798 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 ALDH1A3P47895 512 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 POU4F1Q01851 419 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 RAD51Q06609 339 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 IMPG1Q17R60 797 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 THOC7Q6I9Y2 204 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 TMEM53Q6P2H8 277 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 ZYG11AQ6WRX3 759 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 DENND1CQ8IV53 801 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 ZMIZ2Q8NF64 920 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 TRPC4APQ8TEL6 797 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 FAR2Q96K12 515 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 DNAJC28Q9NX36 388 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 BTRCQ9Y297 605 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 A0A087X1B8 175 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 TUFMP49411 452 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 CDH18Q13634 790 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 RBM20Q5T481 1227 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 KIAA0319Q5VV43 1072 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 CLVS1Q8IUQ0 354 aaPredicted RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 SLC22A9Q8IVM8 553 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 DSELQ8IZU8 1212 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 RTL3Q8N8U3 475 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.72
CALD1-203ENST00000393118 S100A14Q9HCY8 104 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 SATB2Q9UPW6 733 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 C15orf38-AP3S2A0A0A6YYH1 394 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 BTN3A1O00481 513 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 CRTAMO95727 393 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 CHRNA1P02708 482 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 HMOX2P30519 316 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 C21orf59P57076 290 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 MRPS15P82914 257 aaKnown RBP10.58□□□□□ -0.72
CALD1-203ENST00000393118 OCA2Q04671 838 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 NIPAL4Q0D2K0 466 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 UPP1Q16831 310 aa10.58□□□□□ -0.72
CALD1-203ENST00000393118 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms