RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PLIN3O60664 434 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 FLT3LGP49771 235 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 FASTKD3Q14CZ7 662 aaKnown RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 PAN2Q504Q3 1202 aaKnown RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 C11orf74Q86VG3 221 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 ADI1Q9BV57 179 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 UGT2B11O75310 529 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 PRKAR1AP10644 381 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 IL2P60568 153 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 TMEM199Q8N511 208 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 HELQQ8TDG4 1101 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 RBMX2Q9Y388 322 aaKnown RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 TRAF6Q9Y4K3 522 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 ASLP04424 464 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 POLR2EP19388 210 aaKnown RBP19.78■□□□□ 0.76
SHANK1-203ENST00000391813 CYP2C18P33260 490 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF621Q6ZSS3 439 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 CMC1Q7Z7K0 106 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 SH3BP4Q9P0V3 963 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 GNPTGQ9UJJ9 305 aa19.78■□□□□ 0.76
SHANK1-203ENST00000391813 CCDC162PA2VCL2 907 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 FOXO6A8MYZ6 492 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 PLCL1Q15111 1095 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 USP39Q53GS9 565 aaKnown RBP19.77■□□□□ 0.76
SHANK1-203ENST00000391813 KLHDC10Q6PID8 442 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 WNT8BQ93098 351 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 HSFY1Q96LI6 401 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 MFSD14AQ96MC6 490 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 SCUBE2Q9NQ36 999 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 PCDHGC3Q9UN70 934 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 MEIS2O14770 477 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 ZNF37AP17032 561 aaPredicted RBP19.77■□□□□ 0.76
SHANK1-203ENST00000391813 THOC7Q6I9Y2 204 aaKnown RBP19.77■□□□□ 0.76
SHANK1-203ENST00000391813 UBR7Q8N806 425 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 RASSF5Q8WWW0 418 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 PRDM12Q9H4Q4 367 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 FBXO5Q9UKT4 447 aa19.77■□□□□ 0.76
SHANK1-203ENST00000391813 LTFP02788 710 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 THRBP10828 461 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 PAX3P23760 479 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 MPSTP25325 297 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 IFNGR2P38484 337 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 ZSWIM7Q19AV6 140 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 ZNF284Q2VY69 593 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 CXCL17Q6UXB2 119 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 OMDQ99983 421 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 POPDC2Q9HBU9 364 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 OPTCQ9UBM4 332 aa19.77■□□□□ 0.75
SHANK1-203ENST00000391813 TRIM32Q13049 653 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 MTA1Q13330 715 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 KCTD19Q17RG1 926 aaPredicted RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 SAPCD2Q86UD0 394 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 UNC93AQ86WB7 457 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 CYP4X1Q8N118 509 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 ZBTB45Q96K62 511 aaPredicted RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 POLD2P49005 469 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 RALGPS1Q5JS13 557 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 RBM4BQ9BQ04 359 aaKnown RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 RBM4Q9BWF3 364 aaKnown RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 FTHL17Q9BXU8 183 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 TRPM5Q9NZQ8 1165 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 A0A0J9YYE9 177 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 PLK4O00444 970 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 HNRNPLP14866 589 aaKnown RBP eCLIP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 ZBED5Q49AG3 693 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 FGD3Q5JSP0 725 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 GK5Q6ZS86 529 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 ITIH5Q86UX2 942 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 STK40Q8N2I9 435 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 REXO5Q96IC2 774 aaKnown RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 OSBPL10Q9BXB5 764 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 YTHDF1Q9BYJ9 559 aaKnown RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 H0YGN5 161 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 PAPSS1O43252 624 aaPredicted RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 CALCAP01258 141 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 ITGA2P17301 1181 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 CDKN2BP42772 138 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 BEX3Q00994 111 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 C5orf22Q49AR2 442 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 NOL9Q5SY16 702 aaKnown RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 SLAIN1Q8ND83 568 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 FAR1Q8WVX9 515 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 NARS2Q96I59 477 aaKnown RBP19.76■□□□□ 0.75
SHANK1-203ENST00000391813 ZFP42Q96MM3 310 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 C1orf21Q9H246 121 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 MIEF1Q9NQG6 463 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 NFS1Q9Y697 457 aa19.76■□□□□ 0.75
SHANK1-203ENST00000391813 ATP6AP2A0A1C7CYW4 349 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 ATP6AP2O75787 350 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 PCNAP12004 261 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 EPHB3P54753 998 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 TPTEP56180 551 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 POTEHQ6S545 545 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 P2RY8Q86VZ1 359 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 TMED5Q9Y3A6 229 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 SAMHD1Q9Y3Z3 626 aaKnown RBP19.75■□□□□ 0.75
SHANK1-203ENST00000391813 SPATA31C2B4DYI2 1134 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 RGS10O43665 173 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 GRK4P32298 578 aa19.75■□□□□ 0.75
SHANK1-203ENST00000391813 PYDC2Q56P42 97 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms