RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 OR1F2PQ96R84 312 aa5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 DDX31Q9H8H2 851 aaKnown RBP5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 BPIFA1Q9NP55 256 aa5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 SLCO3A1Q9UIG8 710 aa5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 A4GNTQ9UNA3 340 aa5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 CDC14AQ9UNH5 594 aa5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 CRYL1Q9Y2S2 319 aa5.94□□□□□ -1.46
SNORA40.4-201ENST00000390971 PLSCR5A0PG75 271 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 SRRM3A6NNA2 597 aaPredicted RBP5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 NPHP1O15259 732 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 SSTR2P30874 369 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 HNRNPH1P31943 449 aaKnown RBP5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 STX2P32856 288 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 COMPP49747 757 aaPredicted RBP5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 TUBP50607 506 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 RPL36AP83881 106 aaKnown RBP5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 PTP4A2Q12974 167 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 GRIK3Q13003 919 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 COASYQ13057 564 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 SGO1Q5FBB7 561 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 RHBDF2Q6PJF5 856 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 LINGO2Q7L985 606 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 DHX40Q8IX18 779 aaKnown RBP5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 KLHL29Q96CT2 875 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 SCMH1Q96GD3 660 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 PGAP2Q9UHJ9 254 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 SNX9Q9Y5X1 595 aa5.93□□□□□ -1.46
SNORA40.4-201ENST00000390971 LOC102724159A0A0B4J2E5 919 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 MAGEA13PA6NCF6 341 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 NPIPB11E5RHQ5 1161 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 SLC16A5O15375 505 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 BCAT2O15382 392 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 EFNA5P52803 228 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 POU3F1Q03052 451 aaPredicted RBP5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 DLG1Q12959 904 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 PWP2Q15269 919 aaKnown RBP5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 AMZ1Q400G9 498 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 TSPYL6Q8N831 410 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 NFKBIDQ8NI38 313 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 CREB3L4Q8TEY5 395 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 IGSF21Q96ID5 467 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 PAIP1Q9H074 479 aaKnown RBP5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 PLEKHA4Q9H4M7 779 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 GAREM1Q9H706 876 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 SLC9A2Q9UBY0 812 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 ARHGAP26Q9UNA1 814 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 UTYO14607 1347 aa5.92□□□□□ -1.46
SNORA40.4-201ENST00000390971 A0A1B0GUV1 79 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SMTNL1A8MU46 457 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SEC14L5O43304 696 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 F9P00740 461 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 ABCD3P28288 659 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 ABCD1P33897 745 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SHMT1P34896 483 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 GNAQP50148 359 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 RAD23BP54727 409 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 EEF1A2Q05639 463 aaKnown RBP5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SNTA1Q13424 505 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 EFNB3Q15768 340 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 TDRPQ86YL5 185 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 ARMC8Q8IUR7 673 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SAAL1Q96ER3 474 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 BICD1Q96G01 975 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 ZNF385AQ96PM9 386 aaKnown RBP5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SLITRK1Q96PX8 696 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 DDX4Q9NQI0 724 aaKnown RBP5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SMARCAL1Q9NZC9 954 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 RCOR1Q9UKL0 485 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SARDHQ9UL12 918 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 SCINQ9Y6U3 715 aa5.91□□□□□ -1.46
SNORA40.4-201ENST00000390971 A0A1W2PQM1 296 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 SNRNP70P08621 437 aaKnown RBP5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 HOXB5P09067 269 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 SRCP12931 536 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 NEXNQ0ZGT2 675 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 GSTA3Q16772 222 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 MMEL1Q495T6 779 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 FAM122CQ6P4D5 195 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 B3GNT6Q6ZMB0 384 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 MTSS1LQ765P7 747 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 SLC46A3Q7Z3Q1 461 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 LMLNQ96KR4 655 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 KXD1Q9BQD3 176 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 RETREG1Q9H6L5 497 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 MKKSQ9NPJ1 570 aaPredicted RBP5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 C9orf78Q9NZ63 289 aaPredicted RBP5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 MALT1Q9UDY8 824 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 FBXO9Q9UK97 447 aaPredicted RBP5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 STON1Q9Y6Q2 735 aa5.9□□□□□ -1.46
SNORA40.4-201ENST00000390971 A0A1B0GVC2 190 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 TMEM202A6NGA9 273 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 A6NLC8 198 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 LRRC53A6NM62 1247 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 NDUFS7O75251 213 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 TIPRLO75663 272 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 CLDN14O95500 239 aa5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 DDX5P17844 614 aaKnown RBP5.89□□□□□ -1.47
SNORA40.4-201ENST00000390971 CPOXP36551 454 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms