RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 NMUR1Q9HB89 426 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 OGDHLQ9ULD0 1010 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 ZNF711Q9Y462 761 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 KCTD3Q9Y597 815 aa12.16□□□□□ -0.46
CAPRIN1-202ENST00000389645 KCNU1A8MYU2 1149 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 E9PAM4 449 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 INPPL1O15357 1258 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 APOA4P06727 396 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 MYL4P12829 197 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 RPL17P18621 184 aaKnown RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 TYMPP19971 482 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 MNX1P50219 401 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 BTKQ06187 659 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 RALGDSQ12967 914 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 PTK2BQ14289 1009 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 PRSS55Q6UWB4 352 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 ZYG11AQ6WRX3 759 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 IFNEQ86WN2 208 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 BCL7CQ8WUZ0 217 aaPredicted RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 MRPL1Q9BYD6 325 aaKnown RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 EFCAB1Q9HAE3 211 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 SARS2Q9NP81 518 aaKnown RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 RRN3Q9NYV6 651 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 IRAK2O43187 625 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 PEX1O43933 1283 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 SLC10A7Q0GE19 358 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 CYTH1Q15438 398 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 NRF1Q16656 503 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 CFAP52Q8N1V2 620 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 GPR22Q99680 433 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 STN1Q9H668 368 aaKnown RBP12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 MARCH5Q9NX47 278 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 NSMCE4AQ9NXX6 385 aa12.15□□□□□ -0.46
CAPRIN1-202ENST00000389645 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.47
CAPRIN1-202ENST00000389645 MATN2O00339 956 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 CNTN5O94779 1100 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 OAZ2O95190 189 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 GFAPP14136 432 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 NELFEP18615 380 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 ZNF235Q14590 738 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PITRM1Q5JRX3 1037 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 GPR158Q5T848 1215 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PM20D1Q6GTS8 502 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 BNIPLQ7Z465 357 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 SCD5Q86SK9 330 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 CENPLQ8N0S6 344 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 ACTRT2Q8TDY3 377 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PSMG2Q969U7 264 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 RMDN1Q96DB5 314 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 UXTQ9UBK9 157 aaPredicted RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 TCAF1Q9Y4C2 921 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 SLC12A8A0AV02 714 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 TNFRSF10BO14763 440 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 AIF1P55008 147 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 TBX4P57082 545 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 GALNT3Q14435 633 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 STXBP5Q5T5C0 1151 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PIM3Q86V86 326 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 ERLEC1Q96DZ1 483 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 HMCESQ96FZ2 354 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 DRC3Q9H069 523 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 C1orf21Q9H246 121 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 ENTPD7Q9NQZ7 604 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 FAM50BQ9Y247 325 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 GOLGA4Q13439 2230 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 TMEM114B3SHH9 223 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 MAGEB3O15480 346 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PSMD3O43242 534 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 GALTP07902 379 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 KPNA2P52292 529 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 MAPRE1Q15691 268 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PPP1R3AQ16821 1122 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 RARS2Q5T160 578 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 AGAP9Q5VTM2 703 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 KCTD11Q693B1 232 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 TXNDC5Q8NBS9 432 aaKnown RBP12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 EME1Q96AY2 570 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 SLC39A3Q9BRY0 314 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 PCDHAC1Q9H158 963 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 CCDC68Q9H2F9 335 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 EPS15L1Q9UBC2 864 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 HS3ST4Q9Y661 456 aa12.14□□□□□ -0.47
CAPRIN1-202ENST00000389645 MATN3O15232 486 aa12.13□□□□□ -0.47
CAPRIN1-202ENST00000389645 ADAM12O43184 909 aa12.13□□□□□ -0.47
CAPRIN1-202ENST00000389645 GJB3O75712 270 aa12.13□□□□□ -0.47
CAPRIN1-202ENST00000389645 SERPINH1P50454 418 aaKnown RBP12.13□□□□□ -0.47
CAPRIN1-202ENST00000389645 STX1BP61266 288 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms