RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.24
CCDC57-202ENST00000389641 HPDLQ96IR7 371 aa13.52□□□□□ -0.24
CCDC57-202ENST00000389641 MRIQ9BWK5 157 aa13.52□□□□□ -0.24
CCDC57-202ENST00000389641 TMEM134Q9H6X4 195 aa13.52□□□□□ -0.24
CCDC57-202ENST00000389641 RPF1Q9H9Y2 349 aaKnown RBP13.52□□□□□ -0.24
CCDC57-202ENST00000389641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.242e-7■■■■■ 28.1
CCDC57-202ENST00000389641 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.24
CCDC57-202ENST00000389641 MAP10Q9P2G4 905 aa13.52□□□□□ -0.24
CCDC57-202ENST00000389641 EVLQ9UI08 416 aaPredicted RBP13.52□□□□□ -0.24
CCDC57-202ENST00000389641 TRIM64BA6NI03 449 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 PTGES3LE9PB15 166 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 APOA4P06727 396 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 PCNAP12004 261 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 MZF1P28698 734 aaPredicted RBP13.52□□□□□ -0.25
CCDC57-202ENST00000389641 CASP2P42575 452 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 PITX1P78337 314 aaPredicted RBP13.52□□□□□ -0.25
CCDC57-202ENST00000389641 SLC12A1Q13621 1099 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 ZNF846Q147U1 533 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 MAPRE1Q15691 268 aaKnown RBP13.52□□□□□ -0.25
CCDC57-202ENST00000389641 INAQ16352 499 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 AMHR2Q16671 573 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 PYCR3Q53H96 274 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 ZNF773Q6PK81 442 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 R3HCC1LQ7Z5L2 792 aaKnown RBP13.52□□□□□ -0.25
CCDC57-202ENST00000389641 MFSD6LQ8IWD5 586 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 ANKRD13AQ8IZ07 590 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 ADGRG5Q8IZF4 528 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 RAB2BQ8WUD1 216 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 DUS3LQ96G46 650 aaKnown RBP13.52□□□□□ -0.25
CCDC57-202ENST00000389641 CCDC90BQ9GZT6 254 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 MTRRQ9UBK8 725 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 ERVK-11Q9UQG0 969 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 B3GNT3Q9Y2A9 372 aa13.52□□□□□ -0.25
CCDC57-202ENST00000389641 TARM1B6A8C7 271 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ARPC2O15144 300 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 SEC14L2O76054 403 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 AXLP30530 894 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 KDELC2Q7Z4H8 507 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 KIAA2013Q8IYS2 634 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 SFRP1Q8N474 314 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 PACRGLQ8N7B6 248 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 HEXDCQ8WVB3 486 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 MIR1-1HGQ9H1L0 117 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ATP13A3Q9H7F0 1226 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 PTPRHQ9HD43 1115 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ZNF277Q9NRM2 450 aaPredicted RBP13.51□□□□□ -0.25
CCDC57-202ENST00000389641 EXD2Q9NVH0 621 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC57-202ENST00000389641 SARDHQ9UL12 918 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ZBTB24O43167 697 aaPredicted RBP13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ALBP02768 609 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 LAMTOR4Q0VGL1 99 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 SURF1Q15526 300 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 FAM83EQ2M2I3 478 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 RABL3Q5HYI8 236 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 TMTC4Q5T4D3 741 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 CUZD1Q86UP6 607 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ERO1BQ86YB8 467 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 HMG20AQ9NP66 347 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 WDR70Q9NW82 654 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 CMTM6Q9NX76 183 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 ZNF70Q9UC06 446 aaPredicted RBP13.51□□□□□ -0.25
CCDC57-202ENST00000389641 SPO11Q9Y5K1 396 aa13.51□□□□□ -0.25
CCDC57-202ENST00000389641 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
CCDC57-202ENST00000389641 A0A0J9YYE9 177 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 HTR1BP28222 390 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ATF7IP2Q5U623 682 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 BROXQ5VW32 411 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 TMEM236Q5W0B7 351 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 LCLAT1Q6UWP7 414 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 FRA10AC1Q70Z53 315 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ANKRD13BQ86YJ7 626 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 NRBF2Q96F24 287 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 GPR22Q99680 433 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 CTRCQ99895 268 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 DNAI2Q9GZS0 605 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 DSEQ9UL01 958 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 MTF2Q9Y483 593 aaPredicted RBP13.5□□□□□ -0.25
CCDC57-202ENST00000389641 RAD54BQ9Y620 910 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 HUS1O60921 280 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 INMTO95050 263 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 CPNE6O95741 557 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ALDOCP09972 364 aaKnown RBP13.5□□□□□ -0.25
CCDC57-202ENST00000389641 CDH13P55290 713 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 GTF2IRD2BQ6EKJ0 949 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 GTF2IRD2Q86UP8 949 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ZCCHC7Q8N3Z6 543 aaKnown RBP13.5□□□□□ -0.25
CCDC57-202ENST00000389641 TRPV3Q8NET8 790 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 NSUN6Q8TEA1 469 aaKnown RBP13.5□□□□□ -0.25
CCDC57-202ENST00000389641 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
CCDC57-202ENST00000389641 FAM149B1Q96BN6 582 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ELMO2Q96JJ3 720 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ZFC3H1O60293 1989 aaKnown RBP13.5□□□□□ -0.25
CCDC57-202ENST00000389641 SCN9AQ15858 1988 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 ANKRD34BA5PLL1 514 aa13.5□□□□□ -0.25
CCDC57-202ENST00000389641 AP3B1O00203 1094 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms