RNA–Protein interactions for RNA: ENST00000384245.1

RNU6-17P-201, Transcript of RNA, U6 small nuclear 17, pseudogene, humanhuman

BASIC

Gene RNU6-17P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-17P-201ENST00000384245 RCOR1Q9UKL0 485 aa2.39□□□□□ -2.03
RNU6-17P-201ENST00000384245 CARD8Q9Y2G2 431 aa2.39□□□□□ -2.03
RNU6-17P-201ENST00000384245 LSM4Q9Y4Z0 139 aaKnown RBP2.39□□□□□ -2.03
RNU6-17P-201ENST00000384245 PSAT1Q9Y617 370 aa2.39□□□□□ -2.03
RNU6-17P-201ENST00000384245 A0A0G2JPF8 293 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HNRNPCL3B7ZW38 293 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 LINC01565O15544 149 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HNRNPCL1O60812 293 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 NDUFB4O95168 129 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 CYC1P08574 325 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 F7P08709 466 aaPredicted RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HNRNPA1P09651 372 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 LINC00271P0C7V0 271 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HNRNPCL4P0DMR1 293 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 STX2P32856 288 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 PSMC2P35998 433 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 GPD2P43304 727 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 POU5F1BQ06416 359 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 ACSM2AQ08AH3 577 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 ZNF155Q12901 538 aaPredicted RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 PPP2R5BQ15173 497 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 OASLQ15646 514 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 EIF2S3LQ2VIR3 472 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 AMZ1Q400G9 498 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 SGO1Q5FBB7 561 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 GFI1BQ5VTD9 330 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HIST2H2BCQ6DN03 193 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HIST2H2BDQ6DRA6 164 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 ANKRD54Q6NXT1 300 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 UNQ6126/PRO20091Q6UXV3 157 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 LRRC8DQ7L1W4 858 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 EXOC3L1Q86VI1 746 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 TMTC1Q8IUR5 882 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 SLC35F3Q8IY50 421 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 MUC20Q8N307 709 aaPredicted RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 ZCCHC9Q8N567 271 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 RFLNBQ8N5W9 214 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 SECTM1Q8WVN6 248 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 TANKQ92844 425 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 CD101Q93033 1021 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 GCC1Q96CN9 775 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 ZNF385AQ96PM9 386 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 KXD1Q9BQD3 176 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 MMTAG2Q9BU76 263 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 MAGEE1Q9HCI5 957 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 SDF2L1Q9HCN8 221 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 CNGB3Q9NQW8 809 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 C20orf141Q9NUB4 165 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 TMEM160Q9NX00 188 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 RRN3Q9NYV6 651 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 HSPB7Q9UBY9 170 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 FAM96BQ9Y3D0 163 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 DGKBQ9Y6T7 804 aa2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 ATXN2Q99700 1313 aaKnown RBP2.38□□□□□ -2.03
RNU6-17P-201ENST00000384245 GREB1LQ9C091 1923 aaPredicted RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 IGHV4OR15-8A0A075B7B6 117 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 TEX13CA0A0J9YWL9 993 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GOLGA6L10A0A0M3HER8 536 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 SNAP23O00161 211 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 BMPR1BO00238 502 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 TNPO2O14787 897 aaKnown RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 WNT9BO14905 357 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 MID1O15344 667 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 PLRG1O43660 514 aaKnown RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 LMX1BO60663 402 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GUCY1B2O75343 617 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 KRT36O76013 467 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GAGE7O76087 117 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 HEXAP06865 529 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 UMODP07911 640 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 IFIT1P09914 478 aaKnown RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GAGE12FP0CL80 117 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GAGE12GP0CL81 117 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GAGE12IP0CL82 117 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 AMD1P17707 334 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 AGAP20933 346 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 DGKAP23743 735 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GPTP24298 496 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 MT3P25713 68 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 CHATP28329 748 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 DDIT3P35638 169 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 MAPK9P45984 424 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 PPM1FP49593 454 aaPredicted RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 ZNF132P52740 706 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 UFM1P61960 85 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 RPP30P78346 268 aaKnown RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 ARL16Q0P5N6 197 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GALNT2Q10471 571 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 ILF3Q12906 894 aaKnown RBP eCLIP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GAGE1Q13065 139 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 GAGE4Q13068 117 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 ZBTB17Q13105 803 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 TNFAIP1Q13829 316 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 ZRSR1Q15695 479 aaKnown RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 C2orf68Q2NKX9 166 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 KRTAP24-1Q3LI83 254 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 ATP13A5Q4VNC0 1218 aa2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 CPLX2Q6PUV4 134 aaKnown RBP2.37□□□□□ -2.03
RNU6-17P-201ENST00000384245 LCTLQ6UWM7 567 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms