RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 MFSD6LQ8IWD5 586 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CNTN4Q8IWV2 1026 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 PNPLA1Q8N8W4 532 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 PTCD2Q8WV60 388 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 ZNF689Q96CS4 500 aaPredicted RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 MRM3Q9HC36 420 aaKnown RBP14.35□□□□□ -0.11
CLCN4-201ENST00000380829 THAP1Q9NVV9 213 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 SMPD4Q9NXE4 827 aa14.35□□□□□ -0.11
CLCN4-201ENST00000380829 CCL22O00626 93 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 TXNDC9O14530 226 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 PRRG1O14668 218 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 STC2O76061 302 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 CSF2RAP15509 400 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 GLDCP23378 1020 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 SLC1A6P48664 564 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 AP2B1P63010 937 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 TWF1Q12792 350 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 SIRPB2Q5JXA9 342 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 TMCO4Q5TGY1 634 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 ATG14Q6ZNE5 492 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 RBM15BQ8NDT2 890 aaKnown RBP14.34□□□□□ -0.11
CLCN4-201ENST00000380829 PYDC1Q8WXC3 89 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 OVCA2Q8WZ82 227 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 SPON2Q9BUD6 331 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 ARNT2Q9HBZ2 717 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 CIDEBQ9UHD4 219 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 LAMA3Q16787 3333 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 HEATR9A2RTY3 570 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 BOLA2-SMG1P6H3BVE0 249 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 FCHO1O14526 889 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 AURKAO14965 403 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 VILLO15195 856 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 TSPAN3O60637 253 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 CPA3P15088 417 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 PAMP19021 973 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 HOXD9P28356 352 aaPredicted RBP14.34□□□□□ -0.11
CLCN4-201ENST00000380829 AQP5P55064 265 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
CLCN4-201ENST00000380829 GNA12Q03113 381 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 MSLNQ13421 630 aaPredicted RBP14.34□□□□□ -0.11
CLCN4-201ENST00000380829 ITGA9Q13797 1035 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 CCDC153Q494R4 210 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 C5orf22Q49AR2 442 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 C1orf146Q5VVC0 180 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 KIAA0930Q6ICG6 404 aaPredicted RBP14.34□□□□□ -0.11
CLCN4-201ENST00000380829 PDSS2Q86YH6 399 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 SPNS2Q8IVW8 549 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 CEP70Q8NHQ1 597 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 CEP295NLQ96MC4 621 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 THTPAQ9BU02 230 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
CLCN4-201ENST00000380829 PDFQ9HBH1 243 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 PTTG2Q9NZH5 202 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 SLC7A8Q9UHI5 535 aa14.34□□□□□ -0.11
CLCN4-201ENST00000380829 H3BNC9 293 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 DNAJC6O75061 913 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 ACRP10323 421 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 ARRB2P32121 409 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 RAP1GDS1P52306 607 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 KDSRQ06136 332 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 MED21Q13503 144 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 LRRC26Q2I0M4 334 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 C1orf53Q5VUE5 145 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TPGS2Q68CL5 300 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 C16orf59Q7L2K0 433 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TREML1Q86YW5 311 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 SCUBE1Q8IWY4 988 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 ULK2Q8IYT8 1036 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 SLX1AQ9BQ83 275 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 PRKD2Q9BZL6 878 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 RC3H2Q9HBD1 1191 aaKnown RBP14.33□□□□□ -0.12
CLCN4-201ENST00000380829 NMRAL1Q9HBL8 299 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 KCNK4Q9NYG8 393 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TLK1Q9UKI8 766 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 DNAJC16Q9Y2G8 782 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 FAM95CA0A1B0GW59 222 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 MEI4A8MW99 385 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 SERPINE1P05121 402 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 URODP06132 367 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 ATXN1LP0C7T5 689 aaKnown RBP14.33□□□□□ -0.12
CLCN4-201ENST00000380829 SLC35E2BP0CK96 405 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 RALBP11234 206 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 CDK4P11802 303 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 GLRBP48167 497 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 CDH4P55283 916 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TNK2Q07912 1038 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 GALNT3Q14435 633 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 UGP2Q16851 508 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 RABGAP1LQ5R372 815 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TSTD2Q5T7W7 516 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 NEPROQ6NW34 567 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 FBXL19Q6PCT2 694 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 KLHDC10Q6PID8 442 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 CEP97Q8IW35 865 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TTC16Q8NEE8 873 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 OR13J1Q8NGT2 312 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 TADA1Q96BN2 335 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 PLD4Q96BZ4 506 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 MYRFLQ96LU7 910 aa14.33□□□□□ -0.12
CLCN4-201ENST00000380829 CATSPER2Q96P56 530 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms