RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GOLGA6CA6NDK9 693 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 GOLGA6BA6NDN3 693 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 PRR23AA6NEV1 266 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 C10orf142B7Z368 130 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 NEMP1O14524 444 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 MAP3K13O43283 966 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 LILRB5O75023 590 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 SUN1O94901 812 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 PIRTP0C851 137 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 GOLGA6DP0CG33 693 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 CTAGE8P0CG41 777 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 IVDP26440 423 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 ADCY8P40145 1251 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 GRIA4P48058 902 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 RPL6Q02878 288 aaKnown RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 DENND5AQ6IQ26 1287 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 ERAP2Q6P179 960 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 SYDE1Q6ZW31 735 aaPredicted RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 CTAGE6Q86UF2 777 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 CTAGE4Q8IX94 777 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 DEFB119Q8N690 84 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 PRRX2Q99811 253 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 WRAP53Q9BUR4 548 aaKnown RBP12.72□□□□□ -0.37
SMN1-202ENST00000380707 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 KDM4CQ9H3R0 1056 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 GOLGA6AQ9NYA3 693 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
SMN1-202ENST00000380707 PLXND1Q9Y4D7 1925 aa12.71□□□□□ -0.37
SMN1-202ENST00000380707 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.37
SMN1-202ENST00000380707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 CAPN8A6NHC0 703 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 LRRC72A6NJI9 287 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 PSMD3O43242 534 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 TSPAN6O43657 245 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 NDUFS2O75306 463 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 PCDH8O95206 1070 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 HLA-DPA1P20036 260 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 LHCGRP22888 699 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 CNR2P34972 360 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 GRIA1P42261 906 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.38
SMN1-202ENST00000380707 LMAN1P49257 510 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 PPP2CBP62714 309 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 PPP2CAP67775 309 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 ELP6Q0PNE2 266 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 RALGDSQ12967 914 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 KCNJ11Q14654 390 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 ANKRD22Q5VYY1 191 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 SEL1L3Q68CR1 1132 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 SLC36A4Q6YBV0 504 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 USP45Q70EL2 814 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 DPPA4Q7L190 304 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 MAATS1Q7Z4T9 603 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 TSPAN33Q86UF1 283 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 CEP112Q8N8E3 955 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 CPT1BQ92523 772 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 PREBQ9HCU5 417 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 PIH1D1Q9NWS0 290 aaKnown RBP12.71□□□□□ -0.38
SMN1-202ENST00000380707 ZFR2Q9UPR6 939 aaKnown RBP12.71□□□□□ -0.38
SMN1-202ENST00000380707 SPO11Q9Y5K1 396 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 R4GN57 208 aa12.71□□□□□ -0.38
SMN1-202ENST00000380707 A0A1W2PQU0 124 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 MMP20O60882 483 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 RNGTTO60942 597 aaKnown RBP12.7□□□□□ -0.38
SMN1-202ENST00000380707 FGF1P05230 155 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 IGHV4-34P06331 123 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 VIPR1P32241 457 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 MAGEA6P43360 314 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 LIG3P49916 1009 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 MSLNQ13421 630 aaPredicted RBP12.7□□□□□ -0.38
SMN1-202ENST00000380707 CDKN3Q16667 212 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 NAPEPLDQ6IQ20 393 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 NEK5Q6P3R8 708 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 CRTC1Q6UUV9 634 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 NDUFAF2Q8N183 169 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 MMGT1Q8N4V1 131 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 CADM4Q8NFZ8 388 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 OR52K1Q8NGK4 314 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 LYSMD1Q96S90 227 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 ERP44Q9BS26 406 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 LRRC1Q9BTT6 524 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 TRIM31Q9BZY9 425 aa12.7□□□□□ -0.38
SMN1-202ENST00000380707 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
SMN1-202ENST00000380707 EIF2B3Q9NR50 452 aaKnown RBP12.7□□□□□ -0.38
SMN1-202ENST00000380707 FAM187AA6NFU0 413 aa12.69□□□□□ -0.38
SMN1-202ENST00000380707 AURKAO14965 403 aa12.69□□□□□ -0.38
SMN1-202ENST00000380707 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
SMN1-202ENST00000380707 FSBPO95073 299 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms