RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 IKZF3Q9UKT9 509 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 CDC25CP30307 473 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ITGADQ13349 1161 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 CPSF6Q16630 551 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 USP41Q3LFD5 358 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 XKR6Q5GH73 641 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ABHD15Q6UXT9 468 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 GPR142Q7Z601 462 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 KRT77Q7Z794 578 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 COLGALT2Q8IYK4 626 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PHF10Q8WUB8 498 aaKnown RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ERVK-5Q9HDB9 667 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 MRPL39Q9NYK5 338 aaKnown RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 C1QTNF3-AMACRE9PGA6 284 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 SCAMP3O14828 347 aaKnown RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 FARP2O94887 1054 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 C2P06681 752 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 TPSB2P20231 275 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ZNHIT3Q15649 155 aaPredicted RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 TPSAB1Q15661 275 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 RAET1GQ6H3X3 334 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 COL26A1Q96A83 441 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 LINGO1Q96FE5 620 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PANX1Q96RD7 426 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PCDH12Q9NPG4 1184 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 PNPOQ9NVS9 261 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 EHD3Q9NZN3 535 aa16.11■□□□□ 0.17
COL2A1-202ENST00000380518 ATXN2Q99700 1313 aaKnown RBP16.11■□□□□ 0.17
COL2A1-202ENST00000380518 CST1P01037 141 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 CD52P31358 61 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 XIAPP98170 497 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 USP4Q13107 963 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 C9orf57Q5W0N0 161 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 TMEM139Q8IV31 216 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 RHBGQ9H310 441 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 FAM105AQ9NUU6 356 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 TRAF6Q9Y4K3 522 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 OR6C75A6NL08 312 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 PRR5-ARHGAP8B1AHC4 643 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 WARSP23381 471 aaKnown RBP16.1■□□□□ 0.17
COL2A1-202ENST00000380518 SLC7A2P52569 658 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 ARHGAP8P85298 464 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 CSPG4P5Q96PW8 444 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 TRIM17Q9Y577 477 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 PCDHB9Q9Y5E1 797 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 CDH13P55290 713 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 TEX44Q53QW1 395 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 R3HCC1LQ7Z5L2 792 aaKnown RBP16.1■□□□□ 0.17
COL2A1-202ENST00000380518 AMIGO2Q86SJ2 522 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 ZNF540Q8NDQ6 660 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 KBTBD8Q8NFY9 601 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 PPP1R13LQ8WUF5 828 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
COL2A1-202ENST00000380518 CPXM1Q96SM3 734 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 ZNHIT2Q9UHR6 403 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 LINC00032P0C843 101 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 EVX2Q03828 476 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 GALNT3Q14435 633 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 MZT2AQ6P582 158 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 CNSTQ6PJW8 725 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 IZUMO1Q8IYV9 350 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 EFCAB3Q8N7B9 438 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
COL2A1-202ENST00000380518 SLC27A5Q9Y2P5 690 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 PLLPQ9Y342 182 aa16.1■□□□□ 0.17
COL2A1-202ENST00000380518 H7C0S8 307 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 COL6A2P12110 1019 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 HOXB6P17509 224 aaKnown RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 PPIBP23284 216 aaKnown RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CRHR1P34998 444 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 FAM84AQ96KN4 292 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SLC38A2Q96QD8 506 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 RTKNQ9BST9 563 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 NFKBIL1Q9UBC1 381 aaPredicted RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 VPS4AQ9UN37 437 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 ERGIC3Q9Y282 383 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 R3HDM2Q9Y2K5 976 aaKnown RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SAMHD1Q9Y3Z3 626 aaKnown RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 RFXANKO14593 260 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 PAGE1O75459 146 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 TGDSO95455 350 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 NR2F1P10589 423 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CTSEP14091 401 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 TRIM40Q6P9F5 258 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SERPINA13PQ6UXR4 307 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 AHCYL2Q96HN2 611 aaKnown RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 ITCHQ96J02 903 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 NXF3Q9H4D5 531 aaKnown RBP16.09■□□□□ 0.17
COL2A1-202ENST00000380518 COMMD3-BMI1R4GMX3 469 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 BBIP1A8MTZ0 92 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SLC22A3O75751 556 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 MC4RP32245 332 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 TUSC3Q13454 348 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 RGS21Q2M5E4 152 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CUZD1Q86UP6 607 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CORO1BQ9BR76 489 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 CLIC5Q9NZA1 410 aa16.09■□□□□ 0.17
COL2A1-202ENST00000380518 SLC9A8Q9Y2E8 581 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms