RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 CHST9Q7L1S5 443 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 SETD3Q86TU7 594 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 RNF168Q8IYW5 571 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 AFAP1L2Q8N4X5 818 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 GPR150Q8NGU9 434 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 KCNV2Q8TDN2 545 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 MYEOVQ96EZ4 313 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 PSKH2Q96QS6 385 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 NDNQ99608 321 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
VPS16-202ENST00000380445 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.68□□□□□ -0.38
VPS16-202ENST00000380445 CEP350Q5VT06 3117 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 A0A0D9SEW6 157 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 ILVBLA1L0T0 632 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 TTC24A2A3L6 582 aaPredicted RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 AURKAO14965 403 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 SLC22A2O15244 555 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 COCHO43405 550 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 DCXO43602 365 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 UPP2O95045 317 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 LUC7L3O95232 432 aaKnown RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 PSMG1O95456 288 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 HOXD9P28356 352 aaPredicted RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 ANKRD33Q7Z3H0 272 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 SDCCAG8Q86SQ7 713 aaPredicted RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 DENND1CQ8IV53 801 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 SLC22A9Q8IVM8 553 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 CCNYL1Q8N7R7 359 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 AGR3Q8TD06 166 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 BLOC1S5Q8TDH9 187 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 CCDC28BQ9BUN5 200 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 EML4Q9HC35 981 aaKnown RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 IGSF5Q9NSI5 407 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 MRGBPQ9NV56 204 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 LRRC42Q9Y546 428 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 HTTP42858 3142 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 TRPC5OSA6NMA1 111 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 E9PBE3 544 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 KLHL41O60662 606 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 RPP40O75818 363 aaKnown RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 CRTAMO95727 393 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 S1PR4O95977 384 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 CCDC166P0CW27 439 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 RPL17P18621 184 aaKnown RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 GLDCP23378 1020 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 CPOXP36551 454 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 NUMBP49757 651 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 VEGFBP49765 207 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 PGGT1BP53609 377 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 VEPH1Q14D04 833 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 TAF11Q15544 211 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 ZNF789Q5FWF6 425 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 TECRLQ5HYJ1 363 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 TET1Q8NFU7 2136 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 FBXO27Q8NI29 283 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 FAR2Q96K12 515 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 UBXN10Q96LJ8 280 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 OLFM1Q99784 485 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 SPON2Q9BUD6 331 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 POMKQ9H5K3 350 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 CWH43Q9H720 699 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 TRPC7Q9HCX4 862 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 PAK6Q9NQU5 681 aaPredicted RBP12.67□□□□□ -0.38
VPS16-202ENST00000380445 MAN1C1Q9NR34 630 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 CDYLQ9Y232 598 aa12.67□□□□□ -0.38
VPS16-202ENST00000380445 GOLGA8QA0A0J9YX86 632 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 A0A1B0GVM2 712 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 GOLGA8OA6NCC3 632 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 TCAF2A6NFQ2 919 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 GOLGA8NF8WBI6 632 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 MUSKO15146 869 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 ABLIM3O94929 683 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 GJB5O95377 273 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 RHOCP08134 193 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 ARSDP51689 593 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 PFKPQ01813 784 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 RCN1Q15293 331 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 ADGRF1Q5T601 910 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 DEFB128Q7Z7B8 93 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 SPATA6LQ8N4H0 392 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 OR7D4Q8NG98 312 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 MAPK15Q8TD08 544 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 TRMT2BQ96GJ1 504 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 TBATAQ96M53 351 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 ZDHHC2Q9UIJ5 367 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 CD3EAPO15446 510 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 STC2O76061 302 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 IPO13O94829 963 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 SOD2P04179 222 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 THRAP10827 490 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 COX4I1P13073 169 aa12.66□□□□□ -0.38
VPS16-202ENST00000380445 HMGA1P17096 107 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 OGNP20774 298 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 CORO1AP31146 461 aaKnown RBP12.66□□□□□ -0.38
VPS16-202ENST00000380445 NSUN2Q08J23 767 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms