RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 HCAR2Q8TDS4 363 aa24.67■■□□□ 1.54
ECHDC3-201ENST00000379215 MRRFQ96E11 262 aaKnown RBP24.67■■□□□ 1.54
ECHDC3-201ENST00000379215 ZNF778Q96MU6 729 aa24.67■■□□□ 1.54
ECHDC3-201ENST00000379215 SMYD2Q9NRG4 433 aa24.67■■□□□ 1.54
ECHDC3-201ENST00000379215 CXorf49A8MYA2 514 aaPredicted RBP24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 SLC7A4O43246 635 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 KRT15P19012 456 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 ILF2Q12905 390 aaKnown RBP24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 THOC5Q13769 683 aaKnown RBP24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 SMAD2Q15796 467 aaKnown RBP24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 UGP2Q16851 508 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 HNRNPA1L2Q32P51 320 aaKnown RBP24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 LEXMQ3ZCV2 418 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 CNTN4Q8IWV2 1026 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 P2RY13Q9BPV8 354 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 C8orf33Q9H7E9 229 aaPredicted RBP24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 IL36AQ9UHA7 158 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 STARD13Q9Y3M8 1113 aa24.66■■□□□ 1.54
ECHDC3-201ENST00000379215 A0A0J9YYE9 177 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 VAPBO95292 243 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 TRBC1P01850 177 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 LPOP22079 712 aaPredicted RBP24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 GP5P40197 560 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 TNFRSF4P43489 277 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 ARCN1P48444 511 aaKnown RBP24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 PRAMEP78395 509 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 HSP90AA5PQ58FG0 334 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 USP45Q70EL2 814 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 UNC5BQ8IZJ1 945 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 KCNK12Q9HB15 430 aa24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 THAP10Q9P2Z0 257 aaPredicted RBP24.65■■□□□ 1.54
ECHDC3-201ENST00000379215 CAPN8A6NHC0 703 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 SIN3BO75182 1162 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 NR1D1P20393 614 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 PSMA3P25788 255 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 GKP32189 559 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 MESP2Q0VG99 397 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 ZNF234Q14588 700 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 TEDDM1Q5T9Z0 273 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 GRTP1Q5TC63 336 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 SERPINA13PQ6UXR4 307 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 KIAA0408Q6ZU52 694 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 RALGPS2Q86X27 583 aaPredicted RBP24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 OR13J1Q8NGT2 312 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 PTPRN2Q92932 1015 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 CHFRQ96EP1 664 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 MSANTD3Q96H12 275 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 GUCD1Q96NT3 240 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 LYSMD1Q96S90 227 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 TMEM245Q9H330 911 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 NLE1Q9NVX2 485 aaPredicted RBP24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 SUN2Q9UH99 717 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 PPIL1Q9Y3C6 166 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 SPO11Q9Y5K1 396 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 ARL5AQ9Y689 179 aa24.64■■□□□ 1.54
ECHDC3-201ENST00000379215 CCDC78A2IDD5 438 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 RPP40O75818 363 aaKnown RBP24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 PRNPP04156 253 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 UGT2B4P06133 528 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 SNRPAP09012 282 aaKnown RBP24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 HADHAP40939 763 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 ZNF140P52738 457 aaPredicted RBP24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 CSE1LP55060 971 aaKnown RBP24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 PFKPQ01813 784 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 ELAVL3Q14576 367 aaKnown RBP24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 PACS1Q6VY07 963 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 Q7L0L9 218 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 DEFB123Q8N688 67 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 CHST14Q8NCH0 376 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 OR8D1Q8WZ84 308 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 MFSD1Q9H3U5 465 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 DKK3Q9UBP4 350 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 SLC2A6Q9UGQ3 507 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 ZNF711Q9Y462 761 aa24.64■■□□□ 1.53
ECHDC3-201ENST00000379215 REV3LO60673 3130 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 TSPAN11A1L157 253 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 PIAS1O75925 651 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 PRKCGP05129 697 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 PIRTP0C851 137 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 HNRNPLP14866 589 aaKnown RBP eCLIP24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 SLC8A1P32418 973 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 ABL2P42684 1182 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 DNAJC3Q13217 504 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 TRABD2AQ86V40 505 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 CYP4X1Q8N118 509 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 SLC44A3Q8N4M1 653 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 SCG3Q8WXD2 468 aaKnown RBP24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 IARS2Q9NSE4 1012 aaKnown RBP24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 LIMD1Q9UGP4 676 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 PKP3Q9Y446 797 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 WASF2Q9Y6W5 498 aa24.63■■□□□ 1.53
ECHDC3-201ENST00000379215 SPECC1L-ADORA2AF8WAN1 911 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 GLULP15104 373 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 ARNTP27540 789 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 CTHP32929 405 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 NEPROQ6NW34 567 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 DSG4Q86SJ6 1040 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 MDGA1Q8NFP4 955 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 GRIN3AQ8TCU5 1115 aa24.62■■□□□ 1.53
ECHDC3-201ENST00000379215 KCNV2Q8TDN2 545 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms