RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 OR4K2Q8NGD2 314 aa19.75■□□□□ 0.75
PCDH8-202ENST00000377942 TRAFD1O14545 582 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 NUP107P57740 925 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 FPGSQ05932 587 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 IYDQ6PHW0 289 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 FAM43BQ6ZT52 329 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 SCLYQ96I15 445 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 LEF1Q9UJU2 399 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 CORO1CQ9ULV4 474 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 AP4S1Q9Y587 144 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 ZFP37Q9Y6Q3 630 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 ZBTB22O15209 634 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 UGT2B4P06133 528 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 POU1F1P28069 291 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 SPAM1P38567 509 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 KRT73Q86Y46 540 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 AADATQ8N5Z0 425 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 NETO2Q8NC67 525 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 OR52K2Q8NGK3 314 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 CD101Q93033 1021 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 TMEM237Q96Q45 408 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 HPS4Q9NQG7 708 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 EVLQ9UI08 416 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 INVSQ9Y283 1065 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 COL2A1P02458 1487 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 YJEFN3A6XGL0 299 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 LRPAP1P30533 357 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 TCEA2Q15560 299 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 PRSS55Q6UWB4 352 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 SEPHS2Q99611 448 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 PIF1Q9H611 641 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 IL1RAPL1Q9NZN1 696 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 AZIN1O14977 448 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 RECQL5O94762 991 aaPredicted RBP19.74■□□□□ 0.75
PCDH8-202ENST00000377942 IMPDH2P12268 514 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 DEPDC1Q5TB30 811 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 SLC4A5Q9BY07 1137 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 GGA2Q9UJY4 613 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 SLC12A4Q9UP95 1085 aa19.74■□□□□ 0.75
PCDH8-202ENST00000377942 ANXA6P08133 673 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 RFC2P35250 354 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 GAD2Q05329 585 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 DNAJC14Q6Y2X3 702 aaPredicted RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 ARL14EPQ8N8R7 260 aaPredicted RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 CEP44Q9C0F1 390 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 SNRPB2P08579 225 aaKnown RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 CACNG1Q06432 222 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 ABRQ12979 859 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 KDM3BQ7LBC6 1761 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 KCTD13Q8WZ19 329 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 CLP1Q92989 425 aaKnown RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 MINDY3Q9H8M7 445 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 PTPRHQ9HD43 1115 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 DUS2Q9NX74 493 aaKnown RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 INSL6Q9Y581 213 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 AOC2O75106 756 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 KRT8P05787 483 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 IRX1P78414 480 aaPredicted RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 CCDC85BQ15834 202 aaPredicted RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 IQCKQ8N0W5 287 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 OR6K2Q8NGY2 324 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 GDAP2Q9NXN4 497 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 ASF1AQ9Y294 204 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 DPYSL2Q16555 572 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 MFSD5Q6N075 450 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 BHLHB9Q6PI77 547 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 RHBDF2Q6PJF5 856 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 CCDC81Q6ZN84 652 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 RAVER1Q8IY67 606 aaKnown RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 COLGALT2Q8IYK4 626 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 POP5Q969H6 163 aaKnown RBP19.73■□□□□ 0.75
PCDH8-202ENST00000377942 DLGAP2Q9P1A6 1054 aa19.73■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3DA0A087WVF3 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3IA0A087WXS9 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3EA0A087X179 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3KA0A087X1G2 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3FA6NER0 549 aaPredicted RBP19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3LB9A6J9 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 MAN1A2O60476 641 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 PEX11AO75192 247 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 C2P06681 752 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3HP0C7X1 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 XKR6Q5GH73 641 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3GQ6DHY5 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3CQ6IPX1 549 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 CNSTQ6PJW8 725 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 CLEC20AQ6ZU45 233 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TMEM192Q8IY95 271 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TBC1D3Q8IZP1 549 aaPredicted RBP19.72■□□□□ 0.75
PCDH8-202ENST00000377942 ZNF567Q8N184 647 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 FEM1CQ96JP0 617 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 EIF2B3Q9NR50 452 aaKnown RBP19.72■□□□□ 0.75
PCDH8-202ENST00000377942 ERVW-1Q9UQF0 538 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 INSIG1O15503 277 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 WDR47O94967 919 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 PROCP04070 461 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 RFTN1Q14699 578 aaPredicted RBP19.72■□□□□ 0.75
PCDH8-202ENST00000377942 SMYD5Q6GMV2 418 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 TMEM110Q86TL2 294 aa19.72■□□□□ 0.75
PCDH8-202ENST00000377942 PROX1Q92786 737 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms