RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	IL4R	P24394	825 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	CCNC	P24863	283 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	PM20D1	Q6GTS8	502 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	CHST15	Q7LFX5	561 aa	Predicted RBP	13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	AFAP1L2	Q8N4X5	818 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	PHOSPHO2	Q8TCD6	241 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	ADAMTS19	Q8TE59	1207 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	ART4	Q93070	314 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	FAXDC2	Q96IV6	333 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	CFHR5	Q9BXR6	569 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	IL22	Q9GZX6	179 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	IL1RL2	Q9HB29	575 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	BRCA1	P38398	1863 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	CCNT2	O60583	730 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	LEFTY1	O75610	366 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	KAT7	O95251	611 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	PRAMEF1	O95521	474 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	RPL10	P27635	214 aa	Known RBP	13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	PPP1R15B	Q5SWA1	713 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	SIPA1	Q96FS4	1042 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	ACOX2	Q99424	681 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	HEPH	Q9BQS7	1158 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	FBXL12	Q9NXK8	326 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	CARNS1	A5YM72	827 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	CXorf49	A8MYA2	514 aa	Predicted RBP	13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	HHLA1	C9JL84	531 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	C1QTNF3-AMACR	E9PGA6	284 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	TMEM189-UBE2V1	I3L0A0	370 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	HOXC8	P31273	242 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	GP5	P40197	560 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	PRR23B	Q6ZRT6	265 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	OSBPL2	Q9H1P3	480 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	MTMR10	Q9NXD2	777 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	WDR87	Q6ZQQ6	2873 aa		13.6	□□□□□ -0.23
DDR1-225	ENST00000376568	MYO10	Q9HD67	2058 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	ARHGAP10	A1A4S6	786 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	MYL2	P10916	166 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	HSPA9	P38646	679 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	RGR	P47804	291 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	STX3	Q13277	289 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	RUNX3	Q13761	415 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	PFKFB4	Q16877	469 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	NADSYN1	Q6IA69	706 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	TPRG1	Q6ZUI0	275 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	SRL	Q86TD4	932 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	CNTD1	Q8N815	330 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	GBA3	Q9H227	469 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	PNPLA8	Q9NP80	782 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	IMP3	Q9NV31	184 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	GULP1	Q9UBP9	304 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	DICER1	Q9UPY3	1922 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	NUMBL	Q9Y6R0	609 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	TNFRSF10B	O14763	440 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	CHAD	O15335	359 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	SMIM24	O75264	130 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	KLF8	O95600	359 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	STAMBP	O95630	424 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	CTSE	P14091	401 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	RPA3	P35244	121 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	SESN3	P58005	492 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	ITPRIPL2	Q3MIP1	535 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	TMEM159	Q96B96	161 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	FOPNL	Q96NB1	174 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	SLC25A51	Q9H1U9	297 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	ATP6AP2	A0A1C7CYW4	349 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	BCLAF3	A2AJT9	711 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	NVL	O15381	856 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	ATP6AP2	O75787	350 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	NDST3	O95803	873 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	RGS4	P49798	205 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	NAGLU	P54802	743 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	IL10RB	Q08334	325 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	WASHC5	Q12768	1159 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	OASL	Q15646	514 aa	Known RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	UHRF1	Q96T88	793 aa	Predicted RBP	13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	CSNK1G1	Q9HCP0	422 aa		13.59	□□□□□ -0.23
DDR1-225	ENST00000376568	FAM83E	Q2M2I3	478 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	TTC31	Q49AM3	519 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	CEP68	Q76N32	757 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	TMPRSS6	Q8IU80	811 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	OR4L1	Q8NH43	312 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	ZNF398	Q8TD17	642 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	MTO1	Q9Y2Z2	717 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	DLEC1	Q9Y238	1755 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	FFAR3	O14843	346 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	CD3EAP	O15446	510 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	GPR42	O15529	346 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	AP2A1	O95782	977 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	MAOB	P27338	520 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	HLA-F	P30511	346 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	NPY2R	P49146	381 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	MNX1	P50219	401 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	HADHB	P55084	474 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	XRCC4	Q13426	336 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	SIRPB2	Q5JXA9	342 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	ZDHHC24	Q6UX98	284 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	NPAS3	Q8IXF0	933 aa		13.58	□□□□□ -0.24
DDR1-225	ENST00000376568	CYP4X1	Q8N118	509 aa		13.58	□□□□□ -0.24

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