RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PYROXD1Q8WU10 500 aa23.03■■□□□ 1.28
HLA-C-202ENST00000376237 CAVIN3Q969G5 261 aa23.03■■□□□ 1.28
HLA-C-202ENST00000376237 RAB7BQ96AH8 199 aa23.03■■□□□ 1.28
HLA-C-202ENST00000376237 EBNA1BP2Q99848 306 aaKnown RBP23.03■■□□□ 1.28
HLA-C-202ENST00000376237 CAPN8A6NHC0 703 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 CRTAMO95727 393 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 ELK3P41970 407 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 NEK3P51956 506 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 PDE1BQ01064 536 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 GAS6Q14393 721 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 POU6F1Q14863 301 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 CASC4Q6P4E1 433 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 ERN2Q76MJ5 926 aaKnown RBP23.02■■□□□ 1.28
HLA-C-202ENST00000376237 PARS2Q7L3T8 475 aaKnown RBP23.02■■□□□ 1.28
HLA-C-202ENST00000376237 NLRP9Q7RTR0 991 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 TMC3Q7Z5M5 1100 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 SPEM1Q8N4L4 309 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 FBXO36Q8NEA4 188 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 PPHLN1Q8NEY8 458 aaKnown RBP23.02■■□□□ 1.28
HLA-C-202ENST00000376237 FLCNQ8NFG4 579 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 BLOC1S5Q8TDH9 187 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 ARRDC3Q96B67 414 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 STAMBPL1Q96FJ0 436 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 SIPA1Q96FS4 1042 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 MRM3Q9HC36 420 aaKnown RBP23.02■■□□□ 1.28
HLA-C-202ENST00000376237 SYBUQ9NX95 663 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 MAD1L1Q9Y6D9 718 aa23.02■■□□□ 1.28
HLA-C-202ENST00000376237 CYP2A6P11509 494 aaPredicted RBP23.01■■□□□ 1.27
HLA-C-202ENST00000376237 HNF1BP35680 557 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 POM121L1PQ3SYA9 428 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 ERAP2Q6P179 960 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 TRMT10CQ7L0Y3 403 aaKnown RBP23.01■■□□□ 1.27
HLA-C-202ENST00000376237 PEX13Q92968 403 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 TTC25Q96NG3 672 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 KIFC1Q9BW19 673 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.01■■□□□ 1.27
HLA-C-202ENST00000376237 SOX13Q9UN79 622 aa23.01■■□□□ 1.27
HLA-C-202ENST00000376237 TCRBV21S2A2A0A5A6 115 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 C2orf81A6NN90 581 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 MID1O15344 667 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 ALDH1A2O94788 518 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 TTC4O95801 387 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 CTPS1P17812 591 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 ELP6Q0PNE2 266 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 TAF1AQ15573 450 aaPredicted RBP23■■□□□ 1.27
HLA-C-202ENST00000376237 TTC31Q49AM3 519 aaPredicted RBP23■■□□□ 1.27
HLA-C-202ENST00000376237 DENND2CQ68D51 928 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 AGGF1Q8N302 714 aaeCLIP23■■□□□ 1.27
HLA-C-202ENST00000376237 MPP5Q8N3R9 675 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 ERLEC1Q96DZ1 483 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 MRGPRX1Q96LB2 322 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 C19orf43Q9BQ61 176 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 TXLNGYQ9BZA5 131 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 PABPC3Q9H361 631 aaKnown RBP23■■□□□ 1.27
HLA-C-202ENST00000376237 ZC3H7BQ9UGR2 993 aaKnown RBP23■■□□□ 1.27
HLA-C-202ENST00000376237 RIMKLBQ9ULI2 386 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 TCAF1Q9Y4C2 921 aa23■■□□□ 1.27
HLA-C-202ENST00000376237 FAM237BA0A1B0GVD1 139 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 BANF1O75531 89 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 PAPSS2O95340 614 aaPredicted RBP22.99■■□□□ 1.27
HLA-C-202ENST00000376237 POLBP06746 335 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 ALPIP09923 528 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 PIRTP0C851 137 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 ADRB3P13945 408 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 TSHRP16473 764 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 PGAM1P18669 254 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 ABL2P42684 1182 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 PMS2P54278 862 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 CRADDP78560 199 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 FASTKD3Q14CZ7 662 aaKnown RBP22.99■■□□□ 1.27
HLA-C-202ENST00000376237 GLT6D1Q7Z4J2 308 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 TMEM135Q86UB9 458 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 KBTBD6Q86V97 674 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 PALM2Q8IXS6 379 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 HDDC3Q8N4P3 179 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 ZFYVE1Q9HBF4 777 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 PCDH12Q9NPG4 1184 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 CHMP2BQ9UQN3 213 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 SPO11Q9Y5K1 396 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 ANKRD36A6QL64 1941 aa22.99■■□□□ 1.27
HLA-C-202ENST00000376237 GSTA2P09210 222 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 ACADMP11310 421 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 H2AFXP16104 143 aaPredicted RBP22.98■■□□□ 1.27
HLA-C-202ENST00000376237 ZNF30P17039 623 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 DRD3P35462 400 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 P2RY2P41231 377 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 METAP1P53582 386 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 FAM193AP78312 1265 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 CNTN1Q12860 1018 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 HP1BP3Q5SSJ5 553 aaPredicted RBP22.98■■□□□ 1.27
HLA-C-202ENST00000376237 MAMSTRQ6ZN01 415 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 USP30Q70CQ3 517 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 ANKMY2Q8IV38 441 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 AADATQ8N5Z0 425 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 MDGA1Q8NFP4 955 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 C9orf72Q96LT7 481 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 OMDQ99983 421 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 GPR63Q9BZJ6 419 aa22.98■■□□□ 1.27
HLA-C-202ENST00000376237 CDC42EP4Q9H3Q1 356 aaKnown RBP22.98■■□□□ 1.27
HLA-C-202ENST00000376237 CHRAC1Q9NRG0 131 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms