RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 NDUFAF2Q8N183 169 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDPN-202ENST00000376057 ANKRD42Q8N9B4 389 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 DTX3LQ8TDB6 740 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 DYDC1Q8WWB3 177 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 ING5Q8WYH8 240 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 MYO19Q96H55 970 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 MRGPRX3Q96LB0 322 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 CERS4Q9HA82 394 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 SNX15Q9NRS6 342 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 ERVW-1Q9UQF0 538 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 WNT6Q9Y6F9 365 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 APOA4P06727 396 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 SERPINA4P29622 427 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 HMGCLP35914 325 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 CD151P48509 253 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 BMPR2Q13873 1038 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 SEPT6Q14141 434 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 GALNT3Q14435 633 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 EIF4HQ15056 248 aaKnown RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 CDKN3Q16667 212 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 MRNIPQ6NTE8 343 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 AFTPHQ6ULP2 937 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 MFSD6LQ8IWD5 586 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 MDGA1Q8NFP4 955 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 ZNF473Q8WTR7 871 aaKnown RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 ELSPBP1Q96BH3 223 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 PLK2Q9NYY3 685 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 VPS9D1Q9Y2B5 631 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 MTO1Q9Y2Z2 717 aaKnown RBP11.16□□□□□ -0.62
PDPN-202ENST00000376057 SPO11Q9Y5K1 396 aa11.16□□□□□ -0.62
PDPN-202ENST00000376057 ATXN2Q99700 1313 aaKnown RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 A0A087X1B8 175 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 A0A1W2PPC1 479 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 CCDC189A1A4V9 331 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 K7ERQ8 282 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 S1PR4O95977 384 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 PDHA1P08559 390 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 POLR2EP19388 210 aaKnown RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 ADARP55265 1226 aaKnown RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 TCEAL5Q5H9L2 206 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 COL13A1Q5TAT6 717 aaPredicted RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 MBLAC2Q68D91 279 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 KDELC2Q7Z4H8 507 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 RDH11Q8TC12 318 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 FRS2Q8WU20 508 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 RMDN1Q96DB5 314 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 CDKN2AIPNLQ96HQ2 116 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 MCCC1Q96RQ3 725 aaPredicted RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 IQCGQ9H095 443 aaKnown RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 SIRPGQ9P1W8 387 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 PCDHGC4Q9Y5F7 938 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 SCN8AQ9UQD0 1980 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 CHD9Q3L8U1 2897 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 A0A0J9YYE9 177 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 WISP3O95389 354 aaPredicted RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 TRBC1P01850 177 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 TYK2P29597 1187 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 SEC24CP53992 1094 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 PRAMEP78395 509 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 RAD51Q06609 339 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 DMTNQ08495 405 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 CBX2Q14781 532 aaPredicted RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 E2F5Q15329 346 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 SEPT7Q16181 437 aaKnown RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 ATAT1Q5SQI0 421 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 RNF187Q5TA31 235 aaPredicted RBP11.15□□□□□ -0.62
PDPN-202ENST00000376057 ZDHHC20Q5W0Z9 365 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 GLT6D1Q7Z4J2 308 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 OR4L1Q8NH43 312 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 GRIN3AQ8TCU5 1115 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 BLOC1S5Q8TDH9 187 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 HDAC10Q969S8 669 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 TSPAN17Q96FV3 270 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 OSBPL1AQ9BXW6 950 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 SLC17A7Q9P2U7 560 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 SLC17A6Q9P2U8 582 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 STARD13Q9Y3M8 1113 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 ARL5AQ9Y689 179 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 COMMD10Q9Y6G5 202 aa11.15□□□□□ -0.62
PDPN-202ENST00000376057 CAPN8A6NHC0 703 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 HEPACAM2A8MVW5 462 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 NDUFAB1O14561 156 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 CD3EAPO15446 510 aaKnown RBP11.14□□□□□ -0.63
PDPN-202ENST00000376057 ECI2O75521 394 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 CSPG5O95196 566 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 ATP5BP06576 529 aaKnown RBP11.14□□□□□ -0.63
PDPN-202ENST00000376057 FOXN2P32314 431 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 MTHFRP42898 656 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 CTSOP43234 321 aaPredicted RBP11.14□□□□□ -0.63
PDPN-202ENST00000376057 DGKGP49619 791 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 SUOXP51687 545 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
PDPN-202ENST00000376057 TMEM215Q68D42 235 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 ZNF470Q6ECI4 717 aa11.14□□□□□ -0.63
PDPN-202ENST00000376057 SDCCAG8Q86SQ7 713 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms