RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SMPD1P17405 629 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 CYP2C18P33260 490 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 JAG1P78504 1218 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 CRY1Q16526 586 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF549Q6P9A3 640 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PRELID2Q8N945 189 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 BORCS5Q969J3 196 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 CCDC3Q9BQI4 270 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PTCH2Q9Y6C5 1203 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 NHSL1Q5SYE7 1610 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ITGAVP06756 1048 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ITGA7Q13683 1181 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 GNA13Q14344 377 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 DCLRE1AQ6PJP8 1040 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PIWIL4Q7Z3Z4 852 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 SAPCD2Q86UD0 394 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 WDR12Q9GZL7 423 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 IKZF4Q9H2S9 585 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PIGUQ9H490 435 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 KLQ9UEF7 1012 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ING4Q9UNL4 249 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ZBTB14O43829 449 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 CCDC166P0CW27 439 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ETS2P15036 469 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PSMB4P28070 264 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ABCG1P45844 678 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF554Q86TJ5 538 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 SLC41A1Q8IVJ1 513 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 NKAPQ8N5F7 415 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 POMGNT2Q8NAT1 580 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 OR52K1Q8NGK4 314 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 REXO5Q96IC2 774 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ACSS3Q9H6R3 686 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 PLA2G4CQ9UP65 541 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 ERGIC3Q9Y282 383 aa12.34□□□□□ -0.43
NPLOC4-202ENST00000374747 BTN3A3O00478 584 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 HAT1O14929 419 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 TMCC2O75069 709 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 UQCRBP14927 111 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 DGKAP23743 735 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 RPL22P35268 128 aaKnown RBP12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 RDH11Q8TC12 318 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 VPS35Q96QK1 796 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 CCNB1IP1Q9NPC3 277 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 RNF19AQ9NV58 838 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 ARL15Q9NXU5 204 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 COG5Q9UP83 839 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.43
NPLOC4-202ENST00000374747 DHRS12A0PJE2 317 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 SSNA1O43805 119 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 PEX11AO75192 247 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CHKAP35790 457 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CRATP43155 626 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 MMP13P45452 471 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 UNC5AQ6ZN44 842 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 COMMD2Q86X83 199 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 EEF1AKMT1Q8WVE0 214 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 NDNQ99608 321 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 SAE1Q9UBE0 346 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 MKL2Q9ULH7 1088 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 EDF1O60869 148 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 MLYCDO95822 493 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 ECDO95905 644 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 C4BPAP04003 597 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CLCN5P51795 746 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 MAPKAPK3Q16644 382 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 RFX4Q33E94 735 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM183BPQ6ZVS7 135 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 ADAM32Q8TC27 787 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 SELENOMQ8WWX9 145 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 POP5Q969H6 163 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 RCN3Q96D15 328 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 KREMEN1Q96MU8 473 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 NXF3Q9H4D5 531 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 COMMD9Q9P000 198 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM50BQ9Y247 325 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 MTTPP55157 894 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 PIGZQ86VD9 579 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CCDC28BQ9BUN5 200 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CIPCQ9C0C6 399 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 POLR1EQ9GZS1 481 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM124BQ9H5Z6 455 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 SLCO1B3Q9NPD5 702 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 XPNPEP1Q9NQW7 623 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 TUBA8Q9NY65 449 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 ZNF536O15090 1300 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 TSPAN9O75954 239 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 CALCAP01258 141 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 FGFR1P11362 822 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 GABRB2P47870 512 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 BNC1Q01954 994 aa12.33□□□□□ -0.44
NPLOC4-202ENST00000374747 PAGE2BQ5JRK9 111 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms