RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 COX4I2Q96KJ9 171 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 EXD2Q9NVH0 621 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ZC3H13Q5T200 1668 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 OTCP00480 354 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 SNRPB2P08579 225 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ARSJQ5FYB0 599 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 TAPT1Q6NXT6 567 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 FAM183BPQ6ZVS7 135 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 PTGR2Q8N8N7 351 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 FAM81AQ8TBF8 368 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 A0A0A0MRY4 1105 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 DYTNA2CJ06 578 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 CCDC162PA2VCL2 907 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 GLUD1P00367 558 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ERCC2P18074 760 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 PSMD8P48556 350 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 NRG3P56975 720 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 TSHZ1Q6ZSZ6 1077 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 RAVER1Q8IY67 606 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 HNRNPLLQ8WVV9 542 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 SPATA13Q96N96 652 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 SSR3Q9UNL2 185 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ST3GAL5Q9UNP4 418 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 MYO9BQ13459 2157 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 RIC1Q4ADV7 1423 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 CHADO15335 359 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 QKIQ96PU8 341 aaKnown RBP eCLIP13.1□□□□□ -0.311e-7■■■■■ 30.1
SLC44A1-202ENST00000374723 LEF1Q9UJU2 399 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ZSCAN5CA6NGD5 496 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 WRBO00258 174 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ATP6V1G2O95670 118 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 PECAM1P16284 738 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 LPOP22079 712 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 KDELR1P24390 212 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 NDUFA9Q16795 377 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 ANXA8L1Q5VT79 327 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 NPNTQ6UXI9 565 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 PYDC1Q8WXC3 89 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 PPCDCQ96CD2 204 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 MGAT4AQ9UM21 535 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 TRIM64A6NGJ6 449 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 HAT1O14929 419 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 PGRMC2O15173 223 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 TP73O15350 636 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 UGT2B17O75795 530 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 GJB6O95452 261 aa13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 TRUB2O95900 331 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 AARSD1Q9BTE6 412 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-202ENST00000374723 CLCN5P51795 746 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 CHN2P52757 468 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 VGLL4Q14135 290 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 PSMD5Q16401 504 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 OTOP1Q7RTM1 612 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 ALLCQ8N6M5 410 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 CYP2W1Q8TAV3 490 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 GPR152Q8TDT2 470 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 FATE1Q969F0 183 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 MCMBPQ9BTE3 642 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 PLEKHA1Q9HB21 404 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 CHMP1AQ9HD42 196 aaPredicted RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 FZD1Q9UP38 647 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 BTRCQ9Y297 605 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 SAGP10523 405 aaPredicted RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 CDC25CP30307 473 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 RFXANKO14593 260 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 CCL16O15467 120 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 CST1P01037 141 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 PIRTP0C851 137 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 TSPAN8P19075 237 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 GCNT1Q02742 428 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 DEFB115Q30KQ5 88 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 WASHC2DQ5SRD0 308 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 PTCHD4Q6ZW05 846 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 NIPA1Q7RTP0 329 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 LINGO1Q96FE5 620 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 MTF2Q9Y483 593 aaPredicted RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 SSR2P43308 183 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 C2orf73Q8N5S3 287 aaPredicted RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 TSEN15Q8WW01 171 aaKnown RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 SGK2Q9HBY8 427 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 HCN3Q9P1Z3 774 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 SAMHD1Q9Y3Z3 626 aaKnown RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 VIPP01282 170 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 FAUP35544 74 aaKnown RBP13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 GRIA4P48058 902 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 QPRTQ15274 297 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 PTPRNQ16849 979 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 ZNF730Q6ZMV8 503 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 AP2M1Q96CW1 435 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 RNF31Q96EP0 1072 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 OR52E6Q96RD3 313 aa13.09□□□□□ -0.31
SLC44A1-202ENST00000374723 TRIM39Q9HCM9 518 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms