RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SLC34A1Q06495 639 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 RING1Q06587 406 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 FAM83EQ2M2I3 478 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 TECRLQ5HYJ1 363 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 SLAIN1Q8ND83 568 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 CALML6Q8TD86 181 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 PDCD6IPQ8WUM4 868 aaKnown RBP16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 RMDN1Q96DB5 314 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 HIPK3Q9H422 1215 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 DONSONQ9NYP3 566 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 STOML1Q9UBI4 398 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 PPM1HQ9ULR3 514 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 SPO11Q9Y5K1 396 aa16.05■□□□□ 0.16
CNKSR1-202ENST00000374253 A8MT66 165 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 PDHA1P08559 390 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 PIK3R1P27986 724 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 MAPKAPK2P49137 400 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 FBXO48Q5FWF7 155 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 FSCBQ5H9T9 825 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 ZNF549Q6P9A3 640 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 LRRC74BQ6ZQY2 392 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 NET1Q7Z628 596 aaPredicted RBP16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 KDM1BQ8NB78 822 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 C1orf21Q9H246 121 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 PCDHGC4Q9Y5F7 938 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 ANKRD12Q6UB98 2062 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 SERPINF2P08697 491 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 LTA4HP09960 611 aaKnown RBP16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 NUDT2P50583 147 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 CLCN5P51795 746 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 CCNG1P51959 295 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 YBEYP58557 167 aaPredicted RBP16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 ACTR3P61158 418 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 C6orf163Q5TEZ5 329 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 KIAA0408Q6ZU52 694 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 LRRC43Q8N309 656 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 SCG3Q8WXD2 468 aaKnown RBP16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 TADA1Q96BN2 335 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 RANBP9Q96S59 729 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 CLSTN3Q9BQT9 956 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 ZBED2Q9BTP6 218 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 MFSD1Q9H3U5 465 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 NCKIPSDQ9NZQ3 722 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 CDH22Q9UJ99 828 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 CDYLQ9Y232 598 aa16.04■□□□□ 0.16
CNKSR1-202ENST00000374253 NVLO15381 856 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 CD3EAPO15446 510 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 SLC7A4O43246 635 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 CSPG5O95196 566 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 MYL4P12829 197 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 HDCP19113 662 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 TBL3Q12788 808 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 ASPHQ12797 758 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 TAF12Q16514 161 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 USP41Q3LFD5 358 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 AGAP9Q5VTM2 703 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 RNF148Q8N7C7 305 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 DNAJC9Q8WXX5 260 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 CINPQ9BW66 212 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 STX18Q9P2W9 335 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 UBA6A0AVT1 1052 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 H3BNC9 293 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 STC2O76061 302 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 GLP2RO95838 553 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 SPATA31D3P0C874 917 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 BMP1P13497 986 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 HMGA1P17096 107 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 ABL2P42684 1182 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 SLC11A2P49281 568 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 CDKN1CP49918 316 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 ATXN3P54252 364 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 OXCT1P55809 520 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 TRMT5Q32P41 509 aaKnown RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 SPATA31D4Q6ZUB0 917 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 ACAD11Q709F0 780 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 NAT14Q8WUY8 206 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 PTERQ96BW5 349 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 UBA2Q9UBT2 640 aaPredicted RBP16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 LRRC42Q9Y546 428 aa16.03■□□□□ 0.16
CNKSR1-202ENST00000374253 LRRC14BA6NHZ5 514 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 CFLARO15519 480 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 SNAP91O60641 907 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 PAPSS2O95340 614 aaPredicted RBP16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 VHLP40337 213 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 CDH13P55290 713 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 NSUN2Q08J23 767 aaKnown RBP eCLIP16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 PPP1R3AQ16821 1122 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 LRRC36Q1X8D7 754 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 CLEC6AQ6EIG7 209 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 SLC8B1Q6J4K2 584 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 KBTBD2Q8IY47 623 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 SLC26A7Q8TE54 656 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 SLC22A12Q96S37 553 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 BPIFA1Q9NP55 256 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms