RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 PHTF1Q9UMS5 762 aa17.6■□□□□ 0.41
SSBP3-203ENST00000371319 TRAFD1O14545 582 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 SLC9A3R1O14745 358 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 PGLSO95336 258 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 PROCP04070 461 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 BPGMP07738 259 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 PRAMEP78395 509 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 ITIH4Q14624 930 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 USP10Q14694 798 aaKnown RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 PTPRRQ15256 657 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 SPATA21Q7Z572 469 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 KIAA0907Q7Z7F0 614 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 SPATS2Q86XZ4 545 aaKnown RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 LMNTD2Q8IXW0 634 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 TTC30BQ8N4P2 665 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.59■□□□□ 0.412e-6■■□□□ 14.4
SSBP3-203ENST00000371319 KIAA1958Q8N8K9 716 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 GPR150Q8NGU9 434 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 OR6K2Q8NGY2 324 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 GABPB2Q8TAK5 448 aaPredicted RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 PDCD6IPQ8WUM4 868 aaKnown RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 VOPP1Q96AW1 172 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 GRAMD1AQ96CP6 724 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 MYO19Q96H55 970 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 RPL10LQ96L21 214 aaKnown RBP17.59■□□□□ 0.41
SSBP3-203ENST00000371319 TNKS2Q9H2K2 1166 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 ZNF358Q9NW07 568 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 SIRPGQ9P1W8 387 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 HS3ST2Q9Y278 367 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
SSBP3-203ENST00000371319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 RFXAPO00287 272 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 KLF11O14901 512 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 BIRC5O15392 142 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 HTRA2O43464 458 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 PIGNO95427 931 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 IGSF6O95976 241 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 S1PR4O95977 384 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 ABL2P42684 1182 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 MAPK8P45983 427 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 PGGT1BP53609 377 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 SEMA3AQ14563 771 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 DMC1Q14565 340 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 RARS2Q5T160 578 aaKnown RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 CES4AQ5XG92 561 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 OTOAQ7RTW8 1153 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 LDB1Q86U70 411 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 ADIPOR2Q86V24 386 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 CAMK1DQ8IU85 385 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 CEP97Q8IW35 865 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 NPAS3Q8IXF0 933 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 OTUD6BQ8N6M0 293 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 PNPLA1Q8N8W4 532 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 ZNF557Q8N988 423 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 PIH1D2Q8WWB5 315 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 ISG20Q96AZ6 181 aaKnown RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 CDKN2AIPNLQ96HQ2 116 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 ELMO2Q96JJ3 720 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 C1QTNF1Q9BXJ1 281 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 ANKRD6Q9Y2G4 727 aa17.58■□□□□ 0.41
SSBP3-203ENST00000371319 USP15Q9Y4E8 981 aaPredicted RBP17.58■□□□□ 0.41
SSBP3-203ENST00000371319 BMP1P13497 986 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 FSHRP23945 695 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 GKP32189 559 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 VIPR2P41587 438 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 CLCN5P51795 746 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 IRX4P78413 519 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 DBN1Q16643 649 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 FAM78AQ5JUQ0 283 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 RBM20Q5T481 1227 aaKnown RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 ARMC12Q5T9G4 340 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 C22orf39Q6P5X5 142 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 EFHBQ8N7U6 833 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 OR4K2Q8NGD2 314 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 OR2AP1Q8NGE2 309 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 OSCP1Q8WVF1 389 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 SLC2A11Q9BYW1 496 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 IGFLR1Q9H665 355 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 DUS2Q9NX74 493 aaKnown RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 SLC25A13Q9UJS0 675 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 FBXO10Q9UK96 956 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 PCDHB9Q9Y5E1 797 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 KIF26AQ9ULI4 1882 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 C2orf81A6NN90 581 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 CD3EAPO15446 510 aaKnown RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 PHGDHO43175 533 aaKnown RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 GLP2RO95838 553 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 CYP17A1P05093 508 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 SLC35E2BP0CK96 405 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 SAT1P21673 171 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 LPOP22079 712 aaPredicted RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 ALDH3A1P30838 453 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 GRIA4P48058 902 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 TAS2R39P59534 338 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 RAB10P61026 200 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 RPL26P61254 145 aaKnown RBP17.57■□□□□ 0.4
SSBP3-203ENST00000371319 BCL2L1Q07817 233 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 PCLAFQ15004 111 aa17.57■□□□□ 0.4
SSBP3-203ENST00000371319 DHCR24Q15392 516 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms