RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 MFSD7Q6UXD7 560 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 NPNTQ6UXI9 565 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 USP45Q70EL2 814 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 STRADAQ7RTN6 431 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 FAM131BQ86XD5 332 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 RCOR2Q8IZ40 523 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 PYROXD2Q8N2H3 581 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 CCDC185Q8N715 623 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 UBL4BQ8N7F7 174 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 GPATCH11Q8N954 259 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ZSCAN18Q8TBC5 510 aaPredicted RBP3.65□□□□□ -1.82
MCF2-202ENST00000370573 PSMG2Q969U7 264 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 MVB12AQ96EY5 273 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 CEP295NLQ96MC4 621 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 TUBB2BQ9BVA1 445 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 QRSL1Q9H0R6 528 aaKnown RBP3.65□□□□□ -1.82
MCF2-202ENST00000370573 CARD9Q9H257 536 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 SLC28A3Q9HAS3 691 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ABCC13Q9NSE7 274 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.65□□□□□ -1.82
MCF2-202ENST00000370573 MTMR10Q9NXD2 777 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 COX16Q9P0S2 106 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 TTC7AQ9ULT0 858 aaPredicted RBP3.65□□□□□ -1.82
MCF2-202ENST00000370573 USP18Q9UMW8 372 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 GPR45Q9Y5Y3 372 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 HCFC2Q9Y5Z7 792 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 ATG2AQ2TAZ0 1938 aa3.65□□□□□ -1.82
MCF2-202ENST00000370573 MTCL1Q9Y4B5 1905 aaKnown RBP3.65□□□□□ -1.82
MCF2-202ENST00000370573 MYO16Q9Y6X6 1858 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 TRIOBPQ9H2D6 2365 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 FAM47E-STBD1D6RA91 191 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 FAM227AF5H4B4 570 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 H3BML4 177 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 CAPN9O14815 690 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 KPNA5O15131 536 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 CCL16O15467 120 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 FGF10O15520 208 aaPredicted RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 MSI1O43347 362 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 TLR5O60602 858 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 RFPL2O75678 378 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 GLUD1P00367 558 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 MPOP05164 745 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 CSH1P0DML2 217 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 CSH2P0DML3 217 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 MED14OSP0DP75 135 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 RARGP13631 454 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 KDELR1P24390 212 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 IL4RP24394 825 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 ADRA1BP35368 520 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 CDKN2BP42772 138 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 DEUP1Q05D60 604 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 PLD1Q13393 1074 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SSPNQ14714 243 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SIX1Q15475 284 aaPredicted RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 CRY1Q16526 586 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 HADHQ16836 314 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 UAP1L1Q3KQV9 507 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 BOLA3Q53S33 107 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 ERMARDQ5T6L9 678 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SNX30Q5VWJ9 437 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 MSANTD2Q6P1R3 559 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 GAREM2Q75VX8 874 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 OTOP3Q7RTS5 596 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 ZNF572Q7Z3I7 529 aaPredicted RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 POLNQ7Z5Q5 900 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 RBM23Q86U06 439 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 MYLK4Q86YV6 388 aaPredicted RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 TMC8Q8IU68 726 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 ARHGAP18Q8N392 663 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 PPHLN1Q8NEY8 458 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 VN1R2Q8NFZ6 395 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 EXD1Q8NHP7 514 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 FAM71BQ8TC56 605 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 ACTRT1Q8TDG2 376 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SH3RF2Q8TEC5 729 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 HSPH1Q92598 858 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 PGAP3Q96FM1 320 aaPredicted RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 SLITRK1Q96PX8 696 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SNRNP25Q9BV90 132 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 HEMGNQ9BXL5 484 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SMOC2Q9H3U7 446 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 DMRT3Q9NQL9 472 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 TLR8Q9NR97 1041 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 RRN3Q9NYV6 651 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 CLIC5Q9NZA1 410 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 MBD1Q9UIS9 605 aaPredicted RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 CNOT6Q9ULM6 557 aaKnown RBP3.65□□□□□ -1.83
MCF2-202ENST00000370573 FZD10Q9ULW2 581 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 SNX10Q9Y5X0 201 aa3.65□□□□□ -1.83
MCF2-202ENST00000370573 NOTCH4Q99466 2003 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 TEX51A0A1B0GUA7 166 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 LRRD1A4D1F6 860 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 C2orf78A6NCI8 922 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 FAM72CH0Y354 149 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 M0R3H8 397 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 CLGNO14967 610 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 IRAK2O43187 625 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 PRPSAP2O60256 369 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 MOSPD3O75425 235 aa3.64□□□□□ -1.83
MCF2-202ENST00000370573 C1RP00736 705 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms