RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 KIAA1257Q9ULG3 409 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PCDHGB3Q9Y5G1 929 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 C15orf38-AP3S2A0A0A6YYH1 394 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 E2F8A0AVK6 867 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 WASH4PA8MWX3 477 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CLPTM1O96005 669 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF23P17027 643 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 BDNFP23560 247 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CSTF2P33240 577 aaKnown RBP eCLIP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 SOX5P35711 763 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PIK3CAP42336 1068 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 TUFMP49411 452 aaKnown RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 AP2B1P63010 937 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 IFITM2Q01629 132 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 BTKQ06187 659 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 SEPT7Q16181 437 aaKnown RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 OGFRL1Q5TC84 451 aaPredicted RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 AGAP7PQ5VUJ5 663 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ARPINQ7Z6K5 226 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 C14orf80Q86SX3 495 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 FATE1Q969F0 183 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 SSU72Q9NP77 194 aaKnown RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 ACP6Q9NPH0 428 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 NDE1Q9NXR1 346 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 RSL24D1Q9UHA3 163 aaKnown RBP6.94□□□□□ -1.3
CSDE1-204ENST00000369530 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
CSDE1-204ENST00000369530 TRIM64A6NGJ6 449 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 AREL1O15033 823 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CYP26A1O43174 497 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 JRKO75564 520 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ATP5BP06576 529 aaKnown RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 PRKACBP22694 351 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 SLC6A4P31645 630 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TFAMQ00059 246 aaKnown RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 FMO1Q01740 532 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 RALGPS2Q86X27 583 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 MIB1Q86YT6 1006 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TICAM1Q8IUC6 712 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ANKMY2Q8IV38 441 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 KDM1BQ8NB78 822 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 DTWD2Q8NBA8 298 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 OR52K2Q8NGK3 314 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF75CPQ92670 426 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CFAP57Q96MR6 1250 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 NPY6RQ99463 290 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 AIFM2Q9BRQ8 373 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 PDFQ9HBH1 243 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CLEC4EQ9ULY5 219 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 C3orf70A6NLC5 250 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 RASGRF2O14827 1237 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ACOX3O15254 700 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 STC2O76061 302 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TNFAIP8O95379 198 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 OCM2P0CE71 109 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 OCMP0CE72 109 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CCDC130P13994 396 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 PSMA3P25788 255 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 PTGIRP43119 386 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CENPCQ03188 943 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 NIPAL4Q0D2K0 466 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 DNAJC3Q13217 504 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TRPC3Q13507 836 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 PDK4Q16654 411 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 KCTD19Q17RG1 926 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CXorf57Q6NSI4 855 aaKnown RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 FBXL19Q6PCT2 694 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 VPS37AQ8NEZ2 397 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 EPS8L1Q8TE68 723 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CDKL2Q92772 493 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 STMN2Q93045 179 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TRIM31Q9BZY9 425 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TCF7L2Q9NQB0 619 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 MTRF1LQ9UGC7 380 aaKnown RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 NAGPAQ9UK23 515 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 HEPACAM2A8MVW5 462 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 XPOTO43592 962 aaKnown RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 SPOPO43791 374 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ZMPSTE24O75844 475 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 CD58P19256 250 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 HOXD9P28356 352 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TNFRSF4P43489 277 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 MFAP3P55082 362 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 SLC29A2Q14542 456 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 MESDQ14696 234 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 OXA1LQ15070 435 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 C15orf59Q2T9L4 293 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-204ENST00000369530 C6orf183Q5T699 404 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 LINC00299Q6ZSB3 139 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ABI1Q8IZP0 508 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TOR1AIP2Q8NFQ8 470 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ACTRT2Q8TDY3 377 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 ART4Q93070 314 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 TP53INP1Q96A56 240 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 SMARCD1Q96GM5 515 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 NSL1Q96IY1 281 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 C7orf26Q96N11 449 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 MROQ9BYG7 248 aa6.93□□□□□ -1.3
CSDE1-204ENST00000369530 EHD1Q9H4M9 534 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms