RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 MEN1O00255 615 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 CDK2AP1O14519 115 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 PRAMEF10O60809 474 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 DDCP20711 480 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 HOXD10P28358 340 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 HOXA13P31271 388 aaPredicted RBP10.46□□□□□ -0.73
PRDM1-201ENST00000369089 GRIA2P42262 883 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 MPP2Q14168 576 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 RRM2BQ7LG56 351 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 MIB1Q86YT6 1006 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 METTL25Q8N6Q8 603 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 UBR7Q8N806 425 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 ALG3Q92685 438 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 EXT2Q93063 718 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 LENG8Q96PV6 779 aaPredicted RBP10.46□□□□□ -0.73
PRDM1-201ENST00000369089 FAM83DQ9H4H8 585 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 VPS9D1Q9Y2B5 631 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 CNTNAP4Q9C0A0 1308 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 KBTBD13C9JR72 458 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 CSDE1O75534 798 aaKnown RBP10.46□□□□□ -0.73
PRDM1-201ENST00000369089 PGLSO95336 258 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 MYL9P24844 172 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 ECHS1P30084 290 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 SLC26A2P50443 739 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 BCAR1P56945 870 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 FLI1Q01543 452 aaPredicted RBP10.46□□□□□ -0.73
PRDM1-201ENST00000369089 PMS2P3Q13401 168 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 DALRD3Q5D0E6 543 aaKnown RBP10.46□□□□□ -0.73
PRDM1-201ENST00000369089 ATAD3CQ5T2N8 411 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 C11orf88Q6PI97 169 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 CRTC1Q6UUV9 634 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 TRIM48Q8IWZ4 208 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 ATG16L2Q8NAA4 619 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 CCNYQ8ND76 341 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 POF1BQ8WVV4 589 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 KLHL6Q8WZ60 621 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 BEX2Q9BXY8 128 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 NFKBIL1Q9UBC1 381 aaPredicted RBP10.46□□□□□ -0.73
PRDM1-201ENST00000369089 ZNF175Q9Y473 711 aa10.46□□□□□ -0.73
PRDM1-201ENST00000369089 AGRPO00253 132 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 ZNF254O75437 659 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 CRTAPO75718 401 aaPredicted RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 TCF4P15884 667 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 XRCC1P18887 633 aaPredicted RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 RPL14P50914 215 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 SMAD1Q15797 465 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 RIOX2Q8IUF8 465 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 CRELD1Q96HD1 420 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 HYLS1Q96M11 299 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 LRRC4CQ9HCJ2 640 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 MAGED2Q9UNF1 606 aaPredicted RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 POLRMTO00411 1230 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 UPK1BO75841 260 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 MTA2O94776 668 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 OGNP20774 298 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 SBK1Q52WX2 424 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 FBXL19Q6PCT2 694 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 UNC5AQ6ZN44 842 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 GADL1Q6ZQY3 521 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 FAM160B2Q86V87 743 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 ADHFE1Q8IWW8 467 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 AGBL3Q8NEM8 1001 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 ITFG1Q8TB96 612 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 ZDHHC12Q96GR4 267 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 REXO5Q96IC2 774 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 TARS2Q9BW92 718 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 PPIL3Q9H2H8 161 aaKnown RBP10.46□□□□□ -0.74
PRDM1-201ENST00000369089 RERGLQ9H628 205 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 KCNK13Q9HB14 408 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 BARHL2Q9NY43 387 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 ZNF112Q9UJU3 913 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 SLC9A8Q9Y2E8 581 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 PLLPQ9Y342 182 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 TLL2Q9Y6L7 1015 aa10.46□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L15C9J2P7 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L13C9JLJ4 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L11C9JVI0 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L18D6R9N7 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L22D6RA61 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L17D6RBQ6 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L19D6RCP7 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L20D6RJB6 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 SNRPB2P08579 225 aaKnown RBP10.45□□□□□ -0.74
PRDM1-201ENST00000369089 SMIM18P0DKX4 95 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 VAMP7P51809 220 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 EMP3P54852 163 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 CASP7P55210 303 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 SESN2P58004 480 aaPredicted RBP10.45□□□□□ -0.74
PRDM1-201ENST00000369089 OSTNP61366 133 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 SNRPD2P62316 118 aaKnown RBP10.45□□□□□ -0.74
PRDM1-201ENST00000369089 LRRC74AQ0VAA2 488 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L24Q0WX57 530 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 OCLNQ16625 522 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 USP17L6PQ6QN14 398 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 ENOSF1Q7L5Y1 443 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 AP3S1Q92572 193 aa10.45□□□□□ -0.74
PRDM1-201ENST00000369089 MYLPFQ96A32 169 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms